Gossypium hirsutum (upland cotton): 107959926
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Entry
107959926 CDS
T04793
Name
(RefSeq) glutamine--tRNA ligase, cytoplasmic isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107959926
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107959926
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107959926
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
107959926
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
107959926
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107959926
Prokaryotic type
Other AARSs
107959926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C2
tRNA-synt_1c_C
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
107959926
NCBI-ProteinID:
XP_016751588
UniProt:
A0A1U8PMM3
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Position
A05:70786314..70793027
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AA seq
793 aa
AA seq
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MVVKGEESDRILELFLKIGLDERTARNTIANNKVTANLTAVVHEAALANGCDRAIGNLLY
TVATKYPANALVHRPKLLEYVVSSKIKTPAQLEAAFSFLSNVASEEFKRNEFEEACGVGV
EVSLEELTQTVNEIFEEYKAVILERRYRTNVGELFGSIRKKHPWADPKMAKQLVDAKMYE
LLGERTAADDEKPSKKKEKKEKPAKVEKAVVDETPAQPSEEELNPFSIFPAPEDNIKVHT
EVSFSNGSVLRCYNTRERLDNHLKVTVGRVFTRFPPEPNGYLHIGHAKAMFVDFGLAKER
GGCCYLRYDDTNPEAEKKEYINHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGH
AYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFDDMKRGLIEEGKATLRMKQDMQSDN
FNMYDLIAYRIKFTPHPHAGDQWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYW
LLHVLDLYQPYVWEYSRLNVTNTVMSKRKLNYIVTNKYVDGWDDPRLMTLAGLRRRGVTS
TAINSFVRGIGITRSDCSMIRLDRLEYHIREELNKTAPRVLVVLHPLKVVITNLESGSVL
DLDAKKWPDARTDDTSAFYKVPFSNVVYIERSDFRMKDSKDYYGLAPGKSALLRYAFPIK
CTDVILADDKETVLEIRAEYDPSKKSKPKGVLHWVAEPSPGSDPLKIEVRLFDKLFNSEN
PAELDNWLTDLSPNSKVVVPNAYAVPSLGKAAVGDTFQFERLGYFTVDKDSTAEKLVFNR
TVTLKDTYSKGGK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcaaaggcgaagaatctgacagaatcttagagctcttcttaaagattggttta
gacgaacgaactgctcgcaacaccatcgctaacaacaaggtcactgctaatctcactgcc
gtcgttcacgaggctgctttggctaacggatgtgaccgtgcaattggaaatcttttatat
acggttgccacgaagtaccctgcgaatgcactcgtacatcgtccaaagttacttgaatat
gttgtctcttccaagattaagactccggcacagttagaagctgcattttcatttctctcg
aatgttgcatcggaggagtttaagaggaatgaatttgaagaagcatgcggagtaggagtc
gaagtttctctggaggaacttacacagactgtcaatgaaatttttgaagagtataaggct
gtaattttggaacgacgttaccgaacaaatgttggtgaattgtttgggagcattaggaag
aagcatccttgggcggatccaaagatggctaagcaacttgtagatgcaaaaatgtatgag
ttacttggtgagaggacagcagcagatgatgagaagccttctaaaaagaaggaaaagaaa
gagaaacctgctaaagttgaaaaagctgttgttgatgagactcctgcacagccatctgaa
gaagaacttaatccattttcaatatttcctgctccagaagacaatataaaggtgcacaca
gaagtatcttttagcaatggttctgtgctaagatgttacaatacgagggaaaggcttgac
aatcacttgaaggtcaccgtgggaagagtttttactcgtttccctcccgaaccaaatggg
tatctacacattggacatgcaaaagcgatgtttgttgactttggccttgcgaaagagagg
ggtggatgttgctacctcagatatgatgatacaaatcctgaagctgaaaagaaagaatac
attaatcacattgaagaaattgtccagtggatgggctgggaaccattcaagataacttac
actagtgactatttccaagaattgtatgaattagcagtggagctgatacgaaggggtcat
gcatatgttgatcaccagacccctgaagagataaaggagtatagggaaaagaagatgaac
agcccttggagagatagaccaattgctgagtcattaaaactctttgatgacatgaagaga
ggtctgatagaagagggcaaagcaacacttaggatgaagcaagatatgcagagtgataac
ttcaatatgtatgacctcattgcttatcgtatcaagtttactcctcaccctcatgctggg
gatcagtggtgcatttatccgagctatgattatgctcattgcattgtggactctcttgaa
aatatcacacattcactgtgtacacttgaatttgagacgaggcgtgcttcttactattgg
ctgctacatgtattggacctttaccagccatatgtgtgggaatactcacgactgaatgtt
acaaacactgtgatgtctaaacggaagttaaactacatcgtgacaaacaaatatgttgat
ggttgggatgatccccgtctcatgacattagctggtttacgacgtaggggtgtgacttca
actgcaataaattcttttgttcgaggaattggaatcactagaagtgattgtagcatgatt
cgtttggatcgccttgagtatcacataagagaagaattaaacaagacagcacctcgtgta
ttggttgtgctgcatcctcttaaggttgtcataaccaacctcgaatctggttctgttttg
gatcttgatgcaaagaaatggcctgatgctcgaacagatgacacatctgccttttacaag
gtgcccttttcaaatgttgtatatattgagcgctcagatttccggatgaaagattctaaa
gattactatggattggctcctggcaagtcagcactgctaagatatgcattcccaataaag
tgtacagatgtaatattggcagatgataaagaaactgtgcttgagattcgagctgaatac
gatccttccaaaaaaagcaagccgaagggggttctccactgggttgctgaaccgtccccg
ggttctgatccattgaagattgaagtccgattgtttgacaaactctttaattctgagaat
cctgctgaacttgataattggctcactgatctcagcccgaattccaaagtggtggtacct
aatgcatatgcagtgccatcacttggtaaggctgctgtaggggatacatttcagttcgaa
aggctaggctatttcacagttgataaggactcgactgccgagaagcttgtctttaatcgt
acggttacccttaaggatacttacagtaagggtgggaaatag
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