Gossypium hirsutum (upland cotton): 121206230
Help
Entry
121206230 CDS
T04793
Name
(RefSeq) glutamate decarboxylase 5-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00250
Alanine, aspartate and glutamate metabolism
ghi00410
beta-Alanine metabolism
ghi00430
Taurine and hypotaurine metabolism
ghi00650
Butanoate metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121206230
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121206230
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121206230
00430 Taurine and hypotaurine metabolism
121206230
Enzymes [BR:
ghi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
121206230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
121206230
NCBI-ProteinID:
XP_040932846
LinkDB
All DBs
Position
A09:77525154..77527323
Genome browser
AA seq
497 aa
AA seq
DB search
MYSPKYTYFPTRSTAKKETMLAATNPTEEHVHSTFASRYVRAPVPRFKMPEKSIPKDAAY
QVIHDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNM
IANLFHAPVGEEETAVGVGTVGSSEAIMLAGLAFKRRWQHKRKTEGKPTDNPNIVTGANV
QVCWEKFARYFEVGLKEVKLKEGYYVMDPEQAVELVDENTICVAAILGSTLTGEFEDVKT
LNDLLMKKNEETGWGTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA
GVGWVVWRNKEDLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFLRLGFEGYKNI
IENCMENMKVLKQGIENTGRFNILSKDIGVPLVAFSLKDSSKHTVFEIAENLRRFGWILP
AYTMPANAQHVAVLRAVIREDFSHGLAKRLVAHIEQVLKEMDGLPSRLQHKKTERETQEE
VFRYWKRLVDRKIAGVC
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtactctcccaaatatacctattttcctacacgttcaactgcaaaaaaagaaacaatg
ttggcagctacaaacccaacagaggagcatgtgcactccacttttgcttctagatatgtt
cgcgctcctgttccaaggttcaagatgccggagaagtcgattccaaaggacgcggcgtat
caagtaatacatgatgagcttatgctggatggaaatccgaggttgaacttggcttcattt
gttacaacatggatggaacctgagtgtgataagcttatgatggctgcaattaataagaac
tatgttgacatggatgaataccctgtcaccactgaactccagaatcgatgtgtaaacatg
attgcaaacctgttccatgctccggtcggggaagaagagacagcagtaggtgtgggaaca
gttggttcctctgaggctataatgctggctggattagcttttaaaaggaggtggcaacat
aagagaaaaacagagggaaagcccactgataatcccaacatagtcacgggagctaacgtg
caggtttgctgggagaagtttgcaaggtattttgaggtagggctgaaggaagtaaagctg
aaagagggatattacgttatggacccagaacaagcggttgagctagtagatgagaacacc
atatgtgtagcagctattctgggatcaacgctgacaggagagtttgaggacgtgaagacg
ttgaatgacctccttatgaagaaaaatgaggagaccggttggggaacccccattcatgta
gacgctgccagcggaggatttattgctccttttctttacccggatctcgagtgggatttc
cggctgcctttagtgaagagcatcaatgtgagtggccacaaatatggcctcgtctatgct
ggtgttggttgggttgtttggaggaacaaagaggatttgcctgatgatcttgtctttcac
atcaactaccttggctccgatcaacccactttcaccctcaacttctccaaaggctctagt
caaataattgctcagtattaccagtttctacgccttggttttgaggggtacaagaacata
attgagaactgcatggagaatatgaaagtgcttaaacaaggcatagagaacaccgggagg
tttaacatattatcaaaggatataggagtaccgctagtggccttctctctaaaagatagc
agcaaacatacagtgttcgagatagccgagaacttgcgaaggttcggatggatccttccg
gcttatacaatgcctgccaatgcacagcacgtggctgtcctccgagcagtgatccgagaa
gatttcagccatgggctggcgaaaagactggtggcacacattgagcaagtcctcaaggaa
atggatggcctcccgagtcgccttcaacataagaagaccgaaagagaaactcaggaagag
gtctttaggtactggaaacgccttgttgatcgcaagatagctggagtctgttga
DBGET
integrated database retrieval system