Gossypium hirsutum (upland cotton): 121217652
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Entry
121217652 CDS
T04793
Name
(RefSeq) protein ADP-ribosyltransferase PARP3-like isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121217652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
121217652
03036 Chromosome and associated proteins [BR:
ghi03036
]
121217652
03400 DNA repair and recombination proteins [BR:
ghi03400
]
121217652
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
121217652
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121217652
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121217652
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121217652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
PADR1_Zn_ribbon
PADR1_N
WGR
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
121217652
NCBI-ProteinID:
XP_040949351
LinkDB
All DBs
Position
D05:6920511..6924914
Genome browser
AA seq
827 aa
AA seq
DB search
MKVHEKRSHSHAHGTVDEEKIMTRKQKADQLKSNEGKESPKKPKLEADNDQHNGKATTEV
AKEFEEFCKSVREHLSVAQMREILEANGQDSSGSDASVVIKCLDMLFYGPLEKCQICNGD
LEFDGNRYSCKGTYSEWSSCVYKTRSPARKQEPLKLPDSVLNSPVAELVKKYEDPKLRPH
RYVGVTDKPFLGMMISLMGRLSRTHAKTLHVATLLMQQYWKTKIEKHGGTVSNSVVGVTC
LVASPAERERGGSSKLVEAMERGVRVVSEAWLLDSIEKQEAQPLEAYDIVTDLAVDGKGI
PWDKQVPEEHAIESLSAELKLYGKRGVYKDTRLQEQGGQIFEEDGILYNCVFSLCDQGGA
INEYCIMQLIKVPDSNLHLYYKKGRVGDDPNAEERLEEWKDVDGAVKEFVRLFEEVTGNE
FEPWEREKKFQKKPLKFYPIDIDDGVDVRCGGLGLRQLGVAAAHCKLEPMVANFMKVICG
QEIYKYALMEMDLDAPDLPMGMLSNVHLKRCEEVLQEFIEKVKSMKESGPKAEAVWSDFS
QRWFTLMHSSRPFIFRDYQELADHAAASFECVRDIVVASHMIGHMGDDTLDDPLSDRYKK
IGCSISPLDKDSEDYKMILNYVEKTYEPVKLADIEYGISVENIFNVETKEGPSFDEVKKL
PNKRLLWCGTRSSNLLRHLHKGFLPASCSLPVPGYMFGKGIVCSDAAAEAARYGFTAVDR
PEGFLVLAVFSQGEEIVELKNPPEDTKPLEEKKVCVKGLGRKKPDESEYIDWKDDIKVPC
GSLIPSEHQDSPLEYNEYTVYDPRQVSMRFLVGVKFEEKDTVMDAQD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttcatgaaaagaggtctcattctcatgcacatggaactgttgatgaagagaaa
atcatgacaagaaagcagaaagcagaccagttgaaaagcaatgaaggaaaggaatctcca
aagaaacccaagttggaggctgataatgatcaacataatggaaaagctacaactgaggtg
gctaaagagtttgaagagttttgtaaatctgtgagggagcacttatctgttgcacaaatg
agggaaatccttgaagctaatggccaggattcatctggttctgatgcttctgttgtcatc
aaatgcctcgatatgttgttctatggaccattggagaagtgccaaatctgcaatggggat
ttggagtttgatggcaaccgctattcatgcaagggaacttacagtgagtggtcctcttgt
gtatacaaaacaagaagcccagcaaggaagcaagaaccattaaaattgcctgattctgtc
ctgaattcacctgttgctgaattggtaaagaagtacgaggatccaaaactccgccctcac
cgatatgtaggggtcactgacaaacctttcttgggaatgatgatttccctgatgggccgg
cttagtcgcacacatgctaagacccttcatgttgcaactcttctgatgcagcaatactgg
aaaaccaagatagagaaacatggaggaacagtctccaactcagtcgttggtgtaacttgc
ttggttgcttctcccgctgaacgagagcgtgggggctcatccaaactggtagaagcaatg
gaaagaggggtacgagtggtgagtgaagcttggttacttgacagcattgagaagcaagaa
gcacagccattagaagcttatgacatagttacagatcttgctgttgatggcaaaggaatt
ccatgggataaacaagttcctgaagaacatgcaatcgaatcactttcagctgaactcaag
ttgtatggaaaaagaggagtctacaaggatactagattgcaagagcaaggtggccaaata
tttgaggaagatgggatattatacaactgtgtcttttcgctttgcgaccaaggaggagcc
attaatgagtattgcattatgcaactgatcaaagtaccagatagtaacctccacttgtac
tacaagaaagggagagtaggggatgatcctaatgccgaggagcggctcgaggaatggaag
gacgtagatggtgctgtgaaggagtttgttaggctgtttgaggaagtaacaggaaatgaa
tttgagccatgggaaagggagaagaagtttcagaagaagccactgaaattttatcccata
gacattgatgatggggttgatgtgagatgtggaggacttggcctgcgacagctaggggtt
gcagcagcacattgtaaacttgaaccgatggttgcaaacttcatgaaggttatttgcggt
caggagatttacaagtatgcactgatggagatggatttagatgcccctgatttaccaatg
gggatgctctctaatgttcatttgaaaagatgtgaagaggttctacaagagtttatagaa
aaagtgaaatcaatgaaagaatctggacctaaagcagaggcagtttggtcagactttagc
caaagatggttcaccctgatgcattcttccaggcccttcatcttcagggactatcaagag
cttgcagatcatgctgcagcatcattcgagtgtgttcgagacattgttgtggcatcccat
atgattggacacatgggtgatgatactcttgatgacccattgtctgatagatacaagaaa
ataggatgctcaatttctccactggataaagattccgaggactacaagatgatcctcaat
tatgtggaaaaaacttatgaacctgtcaagcttgcagacattgaatatgggatctcagtt
gagaacatcttcaatgtggaaactaaggaaggcccctcgtttgatgaagtaaaaaagctg
ccaaacaagagactcctgtggtgcggtactcggagctcgaacctgttaaggcatttgcat
aaaggcttcctgccagcaagctgttctctaccagttccaggatatatgttcgggaagggc
atagtttgttctgatgctgcagcagaagctgccaggtatggcttcactgctgtagaccgg
cctgaagggttcttggttctcgctgtgttttcacaaggtgaagaaattgtggagctcaag
aacccaccggaggatactaagccattggaagagaagaaagtgtgtgtgaagggactgggg
agaaagaaaccagatgaatcagaatatatagattggaaagatgatatcaaagtcccttgt
ggcagtttgatcccctcagaacaccaggatagccctctcgaatataatgaatacacagtc
tatgatcccagacaggtgagcatgaggttcttggtgggagtgaagtttgaagagaaggat
acagtgatggacgcccaggattga
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