Guyparkeria halophila: GM160_02330
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Entry
GM160_02330 CDS
T06369
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ghl
Guyparkeria halophila
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghl03009
]
GM160_02330 (rimO)
Enzymes [BR:
ghl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GM160_02330 (rimO)
Ribosome biogenesis [BR:
ghl03009
]
Prokaryotic type
ribosomal protein modification factors
GM160_02330 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QGT77822
UniProt:
A0A6I6D8R0
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All DBs
Position
complement(516165..517574)
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AA seq
469 aa
AA seq
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MTHNPPRVGFVSLGCPKALVDSERILTQLRAEGYALSDSYEGAELVIINTCGFIDSAVQE
SLDTIGEALDENGRVIVTGCLGGRDDGELVRETHPNVLAVTGPQAYQEVMDAVHQHLPPR
FDPFVDVMPEPGSQAKGRVGDSADHGQVDADTPSLEDAVGVKLTPRHYAYLKISEGCNHR
CSFCIIPSLRGDLVSRPIGEVMTEAENLVNAGVRELLVVSQDTSAYGVDTRYKLDFWGGR
PLKTRFRELAAALGSLDAWVRLHYVYPYPHVDDAVELMAEGLVLPYLDIPFQHANHRILK
LMKRPASSENVLKRIAKWREICPEITIRSTFIVGFPGETEEEFQELLDFLDEAQLDRVGA
FAYSPVDGATANELPDPVPEDVKQERLARFMEKQAAISAAKLARKVGQRMPVLVDAVDES
GAVARSMADAPEIDGVVYLPEVTDVAPGDFVEVEIVEADEHDLWGVPVP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacccacaatccgccgcgtgtcggcttcgtcagcctcggctgccccaaggccctggtg
gactccgagcgcatcctcacccagctgcgcgccgagggctacgccctgtccgacagctac
gagggcgcggagctggtgatcatcaacacctgcgggttcatcgactcggcggtgcaggag
tcgctcgataccatcggcgaggcactcgacgagaacggccgcgtgatcgtcaccggctgc
ctgggtggccgcgacgacggcgagctggtccgcgagacgcaccccaacgtgctggccgtg
accggaccacaggcctaccaggaggtgatggacgcggttcaccaacacctgccgccgcgg
ttcgacccgttcgtcgacgtgatgcccgaaccgggcagccaggccaagggaagggtcggg
gactcagccgatcacgggcaggtggacgccgacacgccgtcattggaagacgccgtgggc
gtcaagctcaccccgcgccactacgcctacctcaagatttccgagggctgcaatcaccgc
tgcagcttctgcatcatccccagtctgcgcggcgatctcgtcagccggccgatcggcgag
gtgatgaccgaggcggagaacctggtcaacgccggcgtacgcgaactgctggtcgtctcg
caggacacgagcgcctacggcgtcgacacccgctacaagctcgatttctggggcgggcgc
ccgctcaagacccgcttccgcgaactcgccgccgcgctgggctcgctcgacgcctgggtc
cgcctgcactacgtctacccctacccgcacgtcgacgacgccgttgaactgatggccgag
ggcctggtgctgccgtacctggacatcccgttccagcacgcgaaccaccgcatcctcaag
ctgatgaagcgcccggcctcgagcgagaacgtcctcaagcggatcgcgaaatggcgcgag
atctgcccggaaatcaccatccgctcgaccttcatcgtcggctttcctggcgagaccgag
gaggagttccaggaactgctggacttcctcgacgaggcacagctcgatcgcgtcggcgcc
ttcgcctattcgcccgttgacggtgcgaccgccaacgagctgcccgacccggtccccgaa
gacgtcaagcaggaacgactggcgcgcttcatggaaaagcaggcggccatcagcgcggcc
aaactggcccgcaaggtcggccagcgcatgccggtgctggtggatgccgtagacgagtcg
ggcgcggtggcgcgcagcatggccgatgcgccggagatcgacggcgtggtctatctgccg
gaggtcacggacgtcgcgccgggcgacttcgtcgaggtggaaatcgtcgaggccgacgaa
cacgacctgtggggcgtccccgttccctga
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