Gordonia hongkongensis: MVF96_14345
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Entry
MVF96_14345 CDS
T08182
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ghn
Gordonia hongkongensis
Pathway
ghn03030
DNA replication
ghn03410
Base excision repair
ghn03420
Nucleotide excision repair
ghn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MVF96_14345 (polA)
03410 Base excision repair
MVF96_14345 (polA)
03420 Nucleotide excision repair
MVF96_14345 (polA)
03440 Homologous recombination
MVF96_14345 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghn03032
]
MVF96_14345 (polA)
03400 DNA repair and recombination proteins [BR:
ghn03400
]
MVF96_14345 (polA)
Enzymes [BR:
ghn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MVF96_14345 (polA)
DNA replication proteins [BR:
ghn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MVF96_14345 (polA)
DNA repair and recombination proteins [BR:
ghn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MVF96_14345 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MVF96_14345 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
DNA_pol_lambd_f
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
UPG66672
LinkDB
All DBs
Position
complement(3173767..3176547)
Genome browser
AA seq
926 aa
AA seq
DB search
MSPAQSSPATTPAKATGSTGKAAPGAKGKTKQPVLMLLDGHSLAYRAFFALPAENFKTHS
GQTTNAVYGFTSMLINLLRDEEPTHIAAAFDVSRKTFRSEMYPEYKAQRSKSPDEFNGQV
DLTKEVLDALGVSVLAIEGYEADDIIATLATRAREDGYKVLIVTGDRDSLQLVDASTTVL
YPRKGVSDLTRFTPEEVEKKYGLTPTQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREY
GSLAALVDHVDEVKGKVGDALRAHLASVQTNRQLTELVRDMQLPTSPDDLAMVGWDRDRI
HQLFDDLEFRVLRDRLFSTLSSVEPEAEAGFDLDGAVLGAGEVAGWLTEHARTGRVGLAV
TAPHVVVGADPTGVAIAAADGTSAYVDVTALNPEDEAALGDWFADPSAPKAVHEAKWAVH
ALRSRGWKLDGVTSDTSLAAYLVRPGQRTFNLDDLALRYLRRELRADGGPGDGQMSLLDD
DSDGRVAEQHMLEARAVQELADTLDTELDRIDSKPLLTEMELPLSFVLADAEAAGIAVDV
DHFGALERMFADRIRAAAEAAYEVIGEQINLGSPKQLQTILFDKLDMPKTKKTKTGYTTD
ADALQSLYEKTEHPFLAHLLEHRDATRLKVTVDGLLKSVAADGRIHTTFNQTIAATGRLS
STEPNLQNIPVRTEAGREIRRGFIVGADTATGVPYDCLMTADYSQIEMRIMAHLSEDAGL
IEAFNTGEDLHNFVGSRAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDE
AKEQMEAYFARFGGVRDYLHDVVAEARRNEYTATLFGRRRYLPDLNSDNWQRRQAAERMA
LNAPIQGTAADIIKVAMINVHKRLAAEGLTSRTLLQVHDELVIEVASGEREAVEAVVREE
MGNAITLSVPLEVSVGFGRSWDDAAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccagcgcagagttccccggcaacgaccccagccaaggccaccggatcgacgggc
aaggcggcacccggagccaagggcaagaccaagcagccggtgttgatgctgctcgacggg
cactccctggcgtaccgggcgtttttcgcgctcccggcggagaacttcaaaacccattcg
ggtcagacgaccaacgccgtctacggcttcacctcgatgctgatcaacctgctgcgcgat
gaggagcccacgcacatcgccgcggccttcgacgtctcacgcaagacgttccggtcggag
atgtatccggagtacaaggcgcagcggtccaaatccccggacgagttcaacggccaggtc
gatctcaccaaagaggtcctggacgcgctgggtgtctcggtgctggccatcgagggttac
gaggccgacgacatcatcgcgaccttggcgacgcgggcccgggaggacggatacaaggtc
ctgatcgtcaccggtgaccgcgactcgctgcagctcgtcgacgcctccaccacggtgctc
tatccgcgcaaaggcgtgtcggacctcacgcggttcacgcccgaggaggtcgagaagaag
tacggtctcacccccacccagtaccccgattacgccgcgctgcgcggcgaccccagcgac
aacctgccgggtatccccggagtcggggagaagaccgcctcgaagtggatccgcgagtac
gggtcgctcgcggccctcgtcgatcacgtcgacgaggtcaagggcaaggtcggcgacgca
ttgcgcgctcatctggcgtcggtacagaccaaccgacagctcaccgaactcgtccgggac
atgcagctgccgacgtcccccgacgacctggccatggtcgggtgggaccgggaccgtatc
caccagctgttcgacgacctggaattccgggtgttgcgggaccgtctcttctcgacgttg
agttcggtcgaacccgaggcggaagcaggtttcgatctcgacggcgcggtcctgggtgcc
ggtgaggtcgccggatggctgaccgagcatgcgcgcaccggtcgcgtcggtctcgccgtc
accgccccgcatgtcgtggtcggggcggacccgaccggggtggcgatcgcggccgccgat
gggacctccgcctatgtcgatgtgaccgcgctgaatcccgaagacgaggcggcactgggg
gattggttcgccgacccgtccgcgccgaaggcggttcacgaggcgaagtgggccgtacac
gcgctgcgctcacgcggctggaagctcgacggtgtcaccagcgacacctcgctcgcggcc
tacctggtccgaccgggacaacggacgttcaacctcgacgacctcgcgctgcgctacctg
cgtcgtgaactgcgcgccgacggcggcccgggcgacggccagatgtcgttgctcgacgac
gattcggacgggcgggtggccgaacagcacatgctcgaggcgcgggcggtccaggaactc
gccgacacgctcgacacggaactggaccggatcgactccaaaccgctgctcaccgagatg
gaactgccgctgtcgttcgtgctcgccgatgccgaggccgcgggcatcgccgtcgacgtc
gatcatttcggtgccctcgagcggatgttcgccgaccggatccgcgccgcggccgaggcg
gcctacgaggtcatcggagaacagatcaacctcggttcgccgaaacagttgcagaccatt
ctcttcgacaagctggacatgccgaagacgaagaagaccaagaccggctacaccaccgac
gccgacgcgttgcagtcgttgtacgagaagaccgagcatccctttctcgcacacctcctc
gagcaccgcgacgcgacgcggctgaaggtcactgtcgacgggctgctgaagtcggtcgcg
gccgacggacgtattcacacgacgttcaatcagacgatcgccgcgacgggacgcctctcg
tccaccgaaccgaatctgcagaacatcccggtgcgtaccgaggcgggccgcgagatcagg
cgcggcttcatcgtcggcgccgacaccgcgaccggtgtgccctacgactgcctcatgacc
gccgactacagccagatcgagatgcggatcatggcacacctgtcggaggacgccggcctc
atcgaggccttcaacaccggggaagacctccacaacttcgtcgggtcacgggccttcggg
gtgccgatcgacgaggtcaccaccgagatgcgccaccgggtgaaggccatgtcgtatgga
ctcgcttacgggctcagcgcattcgggctcgccgcccagctcaagatcagccgcgacgag
gccaaggagcagatggaggcgtacttcgcgcggttcggcggggtgcgcgattatctgcac
gacgtggtcgccgaggcccgccgaaacgagtacaccgcaacactgttcggtcgccggcgg
tatctgcccgatctgaacagcgacaactggcagcgccggcaggccgcagaacggatggcg
ctcaacgctcccatccagggcaccgccgccgacatcatcaaggtcgcgatgatcaacgtc
cacaagcgcctcgcagctgaagggctcacgtcgcgaacacttctccaggtccacgacgaa
ctcgtgatcgaggtcgcctcgggtgagcgggaggccgtcgaggccgttgtccgggaagag
atgggtaatgccatcaccttgtccgtcccgctggaggtgtcggtcgggttcggacgctcc
tgggacgacgcagctcactga
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