Grimontia hollisae: AL542_13200
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Entry
AL542_13200 CDS
T04260
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
gho
Grimontia hollisae
Pathway
gho00730
Thiamine metabolism
gho01100
Metabolic pathways
gho01240
Biosynthesis of cofactors
gho04122
Sulfur relay system
Module
gho_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AL542_13200
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AL542_13200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gho03016
]
AL542_13200
Enzymes [BR:
gho01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AL542_13200
Transfer RNA biogenesis [BR:
gho03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AL542_13200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
PAPS_reduct
DUF2934
Transcrip_reg
Dak2
Motif
Other DBs
NCBI-ProteinID:
AMG31218
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All DBs
Position
1:2061364..2062812
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AA seq
482 aa
AA seq
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MKFIVKIHPEVMVKSESVRKRFTKILECNIRNILKRKSDAMAVFNRRDHIEVSLKDDAER
DIALSVLTATPGIHHVLEVEQTPFTDLHSIYEIVLPAVREQIEGKSFCVRVKRRGSHDFT
SIDVERYVGGGLNQSVESARVQLRNPEVTVNLEVDREKVNVVRQRHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGAAHEIGVQQTAYYLWEKYGSSAKVKFV
SVDFEPVVAEILEKVDDGQMGVILKRMFMRAASMLAEKFGIQALVTGEALGQVSSQTLTN
LRHIDNVSDTLILRPLINWDKEDIINLAREIGTEDFAKTMPEYCGVISRKPTVKAVKEKL
EAEEAKFDFSILEKVVYDARIIDIRDIEKQSKEKAPEVELVDEIAKDAVVLDIRSPEEED
DKPLEIDGAEVVHIPFFKLATKFGDLDQSKTYLLYCERGVMSRLQALYLQENGYANVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtcaaaattcatcctgaggtgatggttaaaagtgaatctgtacggaag
cgcttcacgaaaattctggaatgtaacatccgaaatattcttaagcgaaagtcagatgca
atggcggtgttcaaccgtcgtgaccatatcgaggtttcgcttaaagatgacgcagagcga
gatatcgcactcagcgtgctgacggcaacgcccggcattcaccatgtactggaagttgag
caaacgccttttactgaccttcacagtatttatgaaattgtgttgcctgcggtacgcgaa
cagattgaaggtaaaagcttctgcgtgcgcgtgaaacgccgtggatctcatgacttcacg
tcgattgatgttgagcgctatgtcggcggtggcctgaaccagagtgtggaatctgcccgc
gttcagctgcgtaatcctgaagtcaccgttaatctggaagttgaccgtgaaaaggtgaac
gttgtacgccagcgtcataaaggtctgggcggtttccctctgggtacgcaggaagatgtg
cttagcctgatctcaggcggttttgactcaggagtttccagctacctgcatatcaaacgc
ggcagcaaggtgcattactgcttctttaatctgggcggtgccgcgcatgagattggcgtg
caacaaaccgcttattatctgtgggagaagtacggctcttctgccaaggtgaaatttgtc
agcgtcgatttcgagccggtagtggcagaaattctggagaaagtggacgacggccagatg
ggcgtgatcctcaagcgcatgtttatgcgcgccgcctccatgctggcggagaagtttggc
attcaggcgttggttaccggtgaagcactgggccaggtctccagccagaccctgactaac
ctgcgccatatcgacaatgtgtctgacaccctgatcctgcgaccgctgatcaactgggat
aaagaggacatcattaatctggcccgtgaaattggtactgaagactttgccaagaccatg
ccggaatactgtggtgtgatttcacgcaaaccgaccgtgaaagcggtgaaagagaagctg
gaagcggaagaagccaagttcgatttcagcattctggagaaggtggtttacgacgcacgt
atcatcgatatccgtgatatcgaaaaacagagcaaagaaaaggcccccgaagttgaactg
gtggatgaaatcgccaaggatgctgtagtgctggatatccgcagtccggaagaagaagat
gacaagccgctggaaatcgatggcgcggaagtggttcatattcctttcttcaaactggca
accaaattcggtgatcttgaccagagtaaaacttacctgctctattgtgagcgtggtgtg
atgagtcgcctgcaggcgctttacttgcaagaaaatggctatgccaacgtcaaggtttat
cgcccgtaa
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