Gilvimarinus sp. DA14: NHM04_10830
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Entry
NHM04_10830 CDS
T08272
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gil
Gilvimarinus sp. DA14
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gil03009
]
NHM04_10830 (rimO)
Enzymes [BR:
gil01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NHM04_10830 (rimO)
Ribosome biogenesis [BR:
gil03009
]
Prokaryotic type
ribosomal protein modification factors
NHM04_10830 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UTF58971
UniProt:
A0A9J7A4N1
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All DBs
Position
2474162..2475571
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AA seq
469 aa
AA seq
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MTVETYTPGKTPSSNPTTTLDAPKKALQEGASAGGNRIGFVSLGCPKNLVDSERILTQLR
TEGYDIVPSYNDADMVIVNTCGFIDSAVEESLATIGEALQENGKVLVTGCLGAKEESIRE
IHPGVLGITGAHAYEQVLEQVHAHIPPAAKHNPFTDLVPPQGIKLTPRHYAYLKISEGCN
HSCSFCIIPSMRGKLVSRPVGQVMSEAERLVKAGVQELLVISQDTSAYGVDARYRTDFWD
GRPMKTDLYNLCKGLGELGVWVRLHYVYPYPNVDNLIPLMAEGKILPYLDIPFQHASPKI
LKAMRRPGQVEKTLERIANWRAQVPELTIRSTFIVGFPGETEEDFQMLLDFLQQAQLDRV
GCFKYSPVDGATANDLPDSVPEDIKQERFDRFMQLQQEISTAKLQQKIGQTMEILIDEID
EEGAIGRTQGDAPEIDGMVYLPAEGLSVGQRIHAVIEHADEYDLWATPV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaaacctatacccccggtaaaacccccagcagcaaccccaccaccactctg
gacgcccccaaaaaagcactgcaagagggtgcgagcgctggcggcaaccgcataggtttt
gtcagcctgggttgccctaaaaacctggtggactccgagcgcattctcacgcagctgcgc
accgagggttacgacattgtgcccagttacaacgatgccgatatggtgattgtgaacacc
tgcggctttatcgacagcgcggtagaagagtccctcgccaccattggcgaggcgctgcaa
gaaaacggcaaagtgctggtcaccggttgtctgggcgccaaggaagagtccatccgcgag
atacacccgggggtgctgggcattaccggcgcccacgcgtacgagcaggtgctggagcag
gtgcacgcgcatattccccctgccgccaagcacaacccgtttaccgatctggtgccgcca
cagggtattaagttaaccccgcgccactacgcctatttaaaaatttccgagggctgtaac
cacagctgcagcttctgcattatcccctccatgcgcggcaaactggtcagccgccctgta
gggcaggtaatgagcgaagcagagcgcttggtgaaagcgggggtgcaagagttactggtt
atctcacaagacacctctgcctatggggtagatgcccgctatcgcaccgacttttgggac
ggccggccgatgaaaaccgacctgtacaatctgtgcaaaggtctgggcgagctgggcgtg
tgggtgcgcctgcattacgtgtacccctacccgaacgtggacaatctgattccactgatg
gcggagggaaaaattctgccctatttggatatcccgttccagcacgccagccccaaaatt
ctcaaggccatgcgccgcccggggcaggtagaaaaaaccctagagcgcatcgccaactgg
cgtgctcaggtgcctgagttaaccattcgctcgacgtttattgtcggctttccaggcgaa
accgaagaagactttcaaatgctgctggactttctgcaacaagcgcagctcgatcgcgta
ggctgttttaaatactcgccggtagacggcgccaccgccaacgacctgcctgattctgta
ccagaggatattaagcaagagcgctttgatcggtttatgcaattgcagcaagaaatatcc
accgccaaactacagcagaaaatcggtcaaaccatggaaattctgatcgatgaaattgat
gaagagggcgccattggccgaacccagggcgatgccccggaaattgacggcatggtgtac
ctgcccgccgagggtttaagcgtaggccagcgcattcacgcagttattgagcacgccgac
gagtacgacctgtgggcaacgcctgtgtag
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