Gimesia benthica: F1728_20760
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Entry
F1728_20760 CDS
T06296
Name
(GenBank) RraA family protein
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
gim
Gimesia benthica
Pathway
gim00362
Benzoate degradation
gim00660
C5-Branched dibasic acid metabolism
gim01100
Metabolic pathways
gim01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
F1728_20760
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F1728_20760
Enzymes [BR:
gim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
F1728_20760
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Motif
Pfam:
RraA-like
Motif
Other DBs
NCBI-ProteinID:
QGQ24975
UniProt:
A0A6I6AI78
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Position
5346825..5347493
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AA seq
222 aa
AA seq
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MNNPTPETITLDMMRESLYSAIVCDALDSIGLTNQSPRKELFPMTVEDVVVGRCKTSLWA
DMYHTDSSPYELELKGVDSINADEIFIAAASGSMRSGIWGELLSTAVKHRGCCGAIIDGA
VRDVRQMREMSFPVWAVGTSPYDSKDRQRIIDLDIPVEIGGVNFSPGDLVIADVDGIVVV
PQEVEDKVIRLAWQKVHEENTFRDSIKAGMSATEAFAKYGIL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccgacccctgaaacaattacgctggacatgatgcgggaatccctctattcg
gccatcgtctgtgatgccctggattccatcggcctgaccaaccagtctccccgcaaggag
ctcttcccgatgacggtcgaggatgtcgtcgtgggccgctgcaaaaccagcctctgggcc
gacatgtaccacacggactccagcccttacgaactggaactcaaaggcgttgattcgatt
aacgcggatgaaatcttcatcgccgctgccagcggttcgatgcggtcgggcatctggggc
gaactcctctctaccgctgtgaaacaccggggctgctgcggagcgatcatcgatggagcc
gttcgcgatgttcgacagatgcgggaaatgtccttccccgtctgggccgtcggcacatcc
ccttatgacagtaaagaccgccagcggattatcgacctcgacattcccgtcgagatcgga
ggtgtcaacttctcccccggtgacctggtgatcgccgacgtggatggcatcgtggttgtc
ccccaggaagtcgaagacaaagtcattcgtctcgcctggcagaaggtgcacgaagaaaac
acattccgtgacagtattaaggcgggcatgtccgccaccgaagccttcgccaaatacggg
atactttga
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