Gimesia benthica: F1728_23810
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Entry
F1728_23810 CDS
T06296
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
gim
Gimesia benthica
Pathway
gim00362
Benzoate degradation
gim01100
Metabolic pathways
gim01120
Microbial metabolism in diverse environments
gim01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F1728_23810
00624 Polycyclic aromatic hydrocarbon degradation
F1728_23810
Enzymes [BR:
gim01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
F1728_23810
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
Big_1
Motif
Other DBs
NCBI-ProteinID:
QGQ25523
UniProt:
A0A6I6AG12
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Position
6150471..6151217
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AA seq
248 aa
AA seq
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MQRQSTSAGRRDFLKWSSFSLAAFTTPGLMAEELIRTPSMTEGPFYPDKMPLDTDNDLLV
INDSITPAVGEITHLTGKVLDSKGNPLRNAFVEIWQVDNKASYIHTRGENKEGRDGNFQG
YGRFLTDSQGKYYFRTIKPVPYRAGRGFRTPHIHVAVSQNGHRILTTQLLVKGHEMNAED
GVYRQIRDPRQRETILVDFKPLPDSKLGELAANFDIILGKTAEENPDGTIKGGIGKSEFG
SRQRPPRR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtcaatcgacaagcgctggtcggcgggattttcttaagtggtcttctttcagt
ctggcggcatttaccacccccgggttaatggcagaggaactgatcaggacgccttccatg
accgaagggccgttctacccggataaaatgcccctggataccgacaatgacctgcttgtg
attaacgattccattacgcctgcagtcggagagatcacgcacctgaccggtaaagttctg
gacagcaaagggaatcccctgcggaatgcctttgtcgaaatctggcaggtggacaataaa
gcctcttacattcatacgcgtggcgaaaataaagaggggcgtgacgggaactttcagggt
tatggccgcttcctgaccgattcccaggggaagtattatttccgcacgatcaagccggtt
ccctatcgggcgggacgcggattccgcacgccgcacattcacgtcgccgtcagtcagaac
ggacaccggattctgactacgcagctgctggtcaaagggcatgagatgaacgcggaagat
ggcgtctaccgtcagatccgcgatcctcggcagcgggaaacgattctggtcgattttaaa
ccgctgcccgattcgaagctgggagagctggcggcgaactttgatatcatcctggggaaa
accgcagaagaaaatccggatggcaccatcaaggggggcatcgggaaatccgagttcggc
agcagacagcgtccgccccgcaggtaa
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