Gekko japonicus (Schlegel's Japanese gecko): 107112245
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Entry
107112245 CDS
T04299
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107112245 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gja04090
]
107112245 (VCAM1)
04091 Lectins [BR:
gja04091
]
107112245 (VCAM1)
CD molecules [BR:
gja04090
]
Proteins
107112245 (VCAM1)
Lectins [BR:
gja04091
]
I-type lectins (Siglecs)
107112245 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
C2-set
Izumo-Ig
Ig_4
ICAM_N
Ig_5
Ig_6
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
107112245
NCBI-ProteinID:
XP_015268831
LinkDB
All DBs
Position
Un
AA seq
531 aa
AA seq
DB search
MARVISEVTALLFFFMNTQAFDVKEIVPGSEVAAEIGSKLVLNCSATGCESPAFSWRTQL
DSPLGGTVSNQGSRSVLTMDPVTFANQHDYLCSASCGGKNKQRTVSIRIFSFPSDPIIEV
SGPLVLGKQASITCRILNVYSSAGLDVYLKKGEALMPMGELAEDFTTASLKTISLATTFT
PTETDIGGKITCEAKLSVENLESKQRQTMQILNVNYGPQKTHITASPGITLLEDGTLMLH
CMTESNPPARILWKKQLANETLQSIGKNHTLSIPNVQFDDSGVYICEVTNEVTNKTENRT
VTVSVQGAPRLPEFSILPSATVNEGEKVTLQCSVESSPAAQIVIRRKLAHKDEILESKDG
IVHIPGVTLDDAGSYECEAENKFGRRKVAGILSVESFPSTAATLTDQPKKITEVEDFDST
SATYNTPQYKSGTLESKPSLAPKDRSPTLYRLSGNDTITYAVDVLAVTNGTEKIEILIVK
TEEPNYVAPVIIGVSSVATVAGPVAAILVYISRKAKINGSYSLVKPLQPQV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggccagggtaatttctgaagtgacagcgcttttattcttcttcatgaacacccaagca
tttgatgttaaggagattgtgccaggtagtgaagttgctgcagagataggcagcaaactg
gtgctaaattgcagtgcaactggctgtgaatccccagctttctcttggagaacccagctg
gactccccgttaggagggactgtgagtaatcaggggagccgttcagtcttgacgatggat
cctgttacctttgcaaatcagcatgattatctctgcagtgcctcttgtgggggcaaaaat
aaacaacggacagtcagcattcgcattttctcatttcccagtgatcccatcattgaggtc
agtggcccacttgttcttgggaaacaagccagcatcacctgtagaattctgaatgtatac
tcttcggctggactggatgtgtacctgaagaaaggagaggctctcatgcccatgggagaa
ctagctgaagattttacaactgcgtctttaaagacaataagtcttgcaactacctttact
cccactgagacagatattgggggaaagatcacttgcgaggctaagttgtcagttgagaac
ctggaatccaagcaaaggcagacgatgcaaatacttaatgtgaattatggtccacagaaa
actcacatcactgcttctccaggcattaccctattggaagatggcactctgatgcttcac
tgcatgactgaaagtaatcccccagcaagaattttatggaaaaaacagctggctaatgaa
actctgcaaagcattggaaaaaatcataccttgtcaattccaaatgttcagtttgacgac
tctggagtctacatctgtgaagtcacaaatgaagtcaccaacaaaacggagaacagaaca
gtgactgtttctgtacaaggtgcccccaggttgccagaattttctatacttccttctgca
acagtgaatgaaggagaaaaggtgacactacagtgctctgtggaaagtagccctgctgcc
cagattgtcataagaagaaaactggcccataaagatgagatacttgaaagcaaggatgga
attgttcatatcccaggtgtgacccttgatgatgctggaagctatgagtgtgaagcagaa
aataaattcgggagaaggaaagtggcaggaatactaagtgtggaatctttcccctcaact
gctgcaacattaaccgatcaaccaaaaaaaattactgaggtggaagattttgatagtaca
agtgcaacctataatactccacaatacaagagtggcactctggaaagcaaaccttcgcta
gcaccaaaggacagaagtcccacattgtacagattatccggaaatgatacaatcacatat
gcggtggatgttttggctgtcaccaatggtacagaaaagatagaaattctcatagtcaaa
acagaagaaccaaattatgtggctcccgtgattattggggtttcttcagtagcaacagtg
gcaggccccgtggcagcgatattggtttacatttccaggaaggcaaagatcaatggatcc
tacagtcttgtaaaaccgctgcaaccacaagtataa
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