Glaesserella sp. 15-184: CJD39_03260
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Entry
CJD39_03260 CDS
T05643
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gle
Glaesserella sp. 15-184
Pathway
gle03030
DNA replication
gle03410
Base excision repair
gle03420
Nucleotide excision repair
gle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJD39_03260
03410 Base excision repair
CJD39_03260
03420 Nucleotide excision repair
CJD39_03260
03440 Homologous recombination
CJD39_03260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gle03032
]
CJD39_03260
03400 DNA repair and recombination proteins [BR:
gle03400
]
CJD39_03260
Enzymes [BR:
gle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJD39_03260
DNA replication proteins [BR:
gle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJD39_03260
DNA repair and recombination proteins [BR:
gle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CJD39_03260
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJD39_03260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUI65651
LinkDB
All DBs
Position
705307..708162
Genome browser
AA seq
951 aa
AA seq
DB search
MATIAQNPLVLVDGSSYLYRAFHAFPPLTNKQGEPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAMIKALGIPLLSIEGVEADDVIGT
LAVQAAQAGKHVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDYL
ALLGDSSDNIPGVKGVGEKTAIALLQGIGSMKAIYANLDKVAELGFRGAKTFAPKLEAEK
ETAALSYLLATIKTDVPLDVTHDQLLTQPQQRDQLVELFGRYEFKRWLNEVMNDANPVTQ
TAAEKIPNNYQATQAVTSEKKFAKIEIDRTAYDCVNTPELFSNWLEKLQAAELVAVDTET
DNLDAMQANLVGISFGLESGEACYIPLAHKGRVAQPTQVDLFGDSENESEETDVLLPNQL
NKADCLAQLKPILENPSIRKIGQNIKYDLTIFARNGIELQGVAFDTMLQSYTLDSTGRHN
MDELAQRYLGHTTIPFEELAGKGKNQLTFDQIPLDKATEYAGEDAEITMKLHQLLWSELQ
KTPELVKLFEQIEMPLVSVLSRVERNGVLIDPAKLLAHSAEIEQRLIELEQQVHQEAGEV
FNLASTKQLQEILFNKLGLPVLKKTPKGAPSTNEEVLEELAQMGHQVPVLLMEHRGLSKL
KSTYTDKLPQMINAQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEQGRRIRQAFIAR
EGYQILAADYSQIELRIMAHLANDANMIKAFADGKDIHRSTAAEIFGVPLDEVTSEQRRS
AKAINFGLIYGMSEFGLSNQLGISRTDAKKYMELYFQRYPAVQQFMLDIREKAAEKGYVE
TLFGRRLYLPEINSSNQMRRKAAERVAINAPMQGTAADIIKVAMIGIDQAVRNCDDIAMI
MQVHDELVFEVKADRVEHYTQLIKSEMEKAIALKVPLIAEVGVGSNWDEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatcgcacaaaatccgcttgttttggtggacgggtcgtcctatttataccgt
gcattccacgcatttccccctttaactaacaaacagggagaaccgacgggggcgatgtat
ggtgtgttgaatatgttaaaaagtttgattgcacaggtcgagccgagccatattgctgtg
gtgtttgatgcgaaaggcaaaacgtttcgtgatgaactgtttgagcagtacaaatctcac
cgtccgccgatgcctgatgagctacgttcgcaaattcagccgttacacgcaatgattaaa
gcactcggtattccgctgttatccattgaaggtgtggaagcagacgatgtgatcggcact
cttgcggtgcaagcggcacaagcaggcaagcacgttttaatcagtacgggcgataaagat
atggctcaactagtgaacgatcatattatgctgattaacacgatgaacaacactttgctc
gaccgtgagggcgtgattgaaaaatacggcattccgcctgaattgattattgactatctc
gccctgcttggcgattcgtccgataacattccaggcgtgaaaggcgtgggcgaaaagacg
gcgattgccttgctacaagggattggctcgatgaaagcgatttatgccaacttagataaa
gtggcggagttgggctttcgtggagcgaaaacttttgccccgaaacttgaagccgaaaaa
gaaacggcggctctctcttatttgttagccacgattaaaaccgatgttccccttgatgtg
acccacgatcaactgctcacccaaccgcaacagcgagatcagctggtggaactctttggg
cgttatgaatttaaacgttggctgaatgaagtgatgaacgatgccaaccctgttacccaa
acggcagcggagaagatcccgaacaattatcaagcgacacaagcggtcacttctgagaaa
aaatttgcaaaaattgagatagatcgcaccgcttacgattgcgtaaatacccctgaattg
ttcagcaactggttggagaaattgcaggcggcggagctagtagcagtcgataccgaaacg
gataaccttgatgcaatgcaagcgaatttggtcggtatttcctttggtttggaaagtggc
gaagcctgttatattccgttggcacacaagggcagagtggctcaaccaacacaggtcgat
ctgtttggcgacagcgaaaatgaaagcgaagagacggacgtgttgctcccaaatcagctc
aacaaagcggactgtttggcacagctcaagccgattttagagaacccgagcattcgtaaa
atcgggcagaatatcaaatacgatttaaccatttttgctcgcaacggcattgagctacaa
ggcgtggcgtttgatacgatgttgcaatcttacacccttgacagcacaggacggcataat
atggacgagttggctcaacgctatttagggcataccaccattccatttgaagagctggca
ggcaagggcaaaaatcagcttacctttgaccaaattccgctcgacaaagccactgaatac
gctggcgaagatgccgaaatcacgatgaaattgcaccaacttttatggtctgaactacaa
aaaacgcctgaattggtgaaactgtttgagcagatcgaaatgccgttggttagcgtgttg
tctcgtgtagaacgcaatggcgtgttgatcgatcctgccaaactgttggcacattcagcg
gaaattgaacagcgtttgattgagctagaacagcaggttcatcaagaagcaggcgaagtg
tttaaccttgcgtccaccaaacagctacaagagattttgttcaacaaattaggcttgcct
gtgttgaagaaaaccccgaaaggcgcgccgtccactaacgaagaagtgttggaagagttg
gcacaaatggggcatcaagtgcctgtgttgttaatggaacatcgtggcttgagcaaactc
aaatcgacctacaccgacaaattgccacagatgatcaacgcacaaacagggcgagtgcat
acctcttatcatcaagcggtaacagcaacagggcgactttcatcaagcgatccgaacttg
cagaacattccgatccgcaacgagcagggcagacgtattcgtcaagcctttattgcccgt
gaaggttatcaaattttagccgccgactattcacaaattgagctacgcattatggctcac
cttgctaatgatgcgaatatgattaaagcctttgcggacggcaaagatattcaccgctca
actgcagccgagattttcggcgtgccgttggacgaagtcactagcgaacaacgccgcagt
gcgaaagcgattaactttggcttgatctacggaatgtcggagtttggcttatctaaccaa
ctcggtatttctcgaacggacgctaaaaaatatatggagctgtatttccaacgctatcca
gcggttcaacagtttatgttagatattcgtgaaaaagcggcggaaaaaggctatgttgag
accctgtttggtcgtcgtttgtatctgcctgaaattaattcgagcaaccaaatgagacgc
aaagcggcagagcgtgtagcaatcaacgccccgatgcaaggcacggcggcagatattatc
aaagtggcaatgatcggcatcgatcaagcggtcagaaattgtgatgatattgcaatgatt
atgcaagttcacgatgaattggtatttgaagtcaaagccgatagagtcgagcattatacg
caactgattaaatccgaaatggaaaaagccattgccttaaaagtgccactgattgcggaa
gtgggcgtgggcagtaattgggatgaagcccattaa
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