Girardinichthys multiradiatus (darkedged splitfin): 124874055
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Entry
124874055 CDS
T08099
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124874055 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmu04090
]
124874055 (vcam1b)
04091 Lectins [BR:
gmu04091
]
124874055 (vcam1b)
CD molecules [BR:
gmu04090
]
Proteins
124874055 (vcam1b)
Lectins [BR:
gmu04091
]
I-type lectins (Siglecs)
124874055 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
ICAM1_3_5_D2
Ig_4
Ig_5
Ig_C17orf99
ICAM_N
C1-set
REJ
Motif
Other DBs
NCBI-GeneID:
124874055
NCBI-ProteinID:
XP_047231179
LinkDB
All DBs
Position
9:3368772..3385859
Genome browser
AA seq
811 aa
AA seq
DB search
MDPLQDHRSFVQLLSVVLLMSSWCVQGLHVNVFPRKPLFRLGARQQMVCWVQDCPTVPSI
SWFTVNDRPLLGSTRTNRTHSVLTFDPVTIEDEGQLACKVICGRQTPQNRTSVSVYSFPS
DPVVTGQDHLRDHLETVLTCQVSDLYPAVDVNFTWLKGDTVLMTTMKDSGSSSIQYLPLR
EDSGGNITCRATLDLQDLPSESRTRETTIPLNVLYAPIIRNMSDPVEVMDGSPLTLSCSA
EGNPEPTITWTVGGRSLQRGRGGQLHLSPVKLSDAGQYECEARNSIGNQTAAIKVTVLAP
PTTTSLSVDPSEEVVEGQQVNITCSSEGAPPPTLVLKREGEELLRTDSASLLNFSLPSAF
LEGSTLYECEASNRYGSQQAFRSITVRAHPLQVEASPEVSAERGSALTLTCRASGCLHPP
TLSWRRTDRNRTLLQKTEQQDGWSQLHLRNLDVQHQGGYSCEAECDSVIRTREIHVQVYS
FPSDPVLEDPGPVLLNKETQFRCDVINIFSANQLRFRWVSGNTTLMTEMYKFSGSLQNIS
SVLKHQFKEVQQVLTCKVELLTEDRGVWRSRWTSIALQIHYPPRSTSLSISPGEEVLEGQ
QVTFTCRSYGAPPPMVVLRKNGDELLRSDPNSSSSVTLSISSTLLEESGHYQCEASNQYG
TQFVSSSITVKAPPRNTTVLILPSTEVQEGQNVTVCCQTISFPPSAVILKKLNNGTELFS
TNGTFLLVNFTSRDSGLYQVNVSNDLGSEIKVFSIRVREVRTGLPPGFNIILISAAAVAA
GLTASALVLDYMRRSRKKGFYQLPQSAPSSA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggacccactgcaggaccacaggagttttgttcagctcctctcagttgtgctgctgatg
tcatcgtggtgcgttcagggtctccatgtcaacgtgtttcccaggaagcctctgttcagg
ctcggcgctcgccagcagatggtctgctgggttcaggactgtcccacggtaccgagcatt
tcctggttcactgttaatgaccgtccgctattggggtctacccgcaccaacagaacgcac
tctgtcctgacctttgaccctgtgacgatagaagacgaaggacagctggcgtgtaaagtc
atttgtggacgacaaacaccacagaaccgaacctctgtcagtgtttactcatttccttca
gaccctgtggtcacaggtcaggaccacctgagagatcacctagagacggtcctcacctgc
caggtgtcagatctgtatcctgctgtggacgtgaacttcacctggctcaaaggagacacc
gttctgatgaccactatgaaagattctgggtccagctccattcagtacctgcccctgaga
gaggactcgggagggaacatcacctgtagggcaacgctggacctgcaggatctgccatct
gagtccagaaccagagagaccaccatccccctaaatgtcctctatgcccctatcatcagg
aatatgtccgaccctgtggaagtgatggacggctctccgctgactctcagctgttctgca
gagggaaaccctgagccgaccatcacctggacagtaggtggtaggtctctgcagcgaggt
cgaggtggtcagctccacttatcgccggtcaaactttcagacgccggacaatacgaatgt
gaagccagaaactcaataggaaaccagactgcagctataaaagtcactgttctagctccg
cccaccacaacctccctgtcggtggatccaagtgaggaggtcgtggaaggtcagcaggtt
aatattacctgtagctctgaaggagctccgcctcctacacttgttctaaagagggaaggg
gaggagcttctgaggactgactccgcctccttactgaacttcagccttccttctgctttt
ctggaaggctccaccctctacgagtgtgaagcctccaaccggtatggctcccagcaggcc
ttcaggtccatcactgttagagctcaccctctgcaggtggaggcgagtcctgaggtctca
gcggagcgaggctcagccctgaccctgacctgcagggcctccgggtgcctgcaccccccc
accctcagctggaggaggacagaccggaaccggaccctcctccagaagacggagcagcag
gacggctggtcacagctccacctgcggaacctggatgtccagcatcagggaggatacagc
tgtgaggctgagtgtgactccgtcatcaggaccagggagatccacgttcaggtctactcg
ttcccctctgatcccgttctggaggatcccggtccagtcctgctgaacaaggaaacccaa
tttcgctgtgatgtcatcaacatcttctcagccaatcagctgaggttccgctgggtttcg
ggaaacacaactttgatgaccgagatgtacaagttctccggttccctgcagaacatctcg
tctgttctaaagcaccagttcaaggaggtgcagcaggtcctgacctgcaaggtggagctg
ctgacagaggatagaggagtttggaggtccagatggaccagcattgctctgcagatccac
tatcctccgaggtcgacctccctgtcaatcagtccaggtgaggaggtcctggagggtcag
caggtgacgtttacctgccgttcatacggagctccgccccccatggtggtgctaaggaag
aatggggatgagcttctaaggagtgaccccaactcctcatcctctgtcaccctcagcatc
tcctccacccttctggaagagtcgggccattaccagtgcgaagcctctaaccagtacggc
acccagtttgtctccagctccatcactgtcaaagctcccccgaggaacactaccgtcctc
atccttccatctacggaggtccaggagggacaaaatgtgactgtctgctgccaaacaatc
agcttcccaccatctgcggtgatcctgaagaagctgaacaacggaaccgagctgttttcc
accaacggcaccttcctgctggtcaacttcacatccagagactcggggttgtaccaggtc
aacgtgagcaacgatctcggctctgagatcaaagtcttcagcatcagagtcagagaggtt
agaaccggacttcctccaggcttcaacatcatcctcatctcagccgctgccgttgctgcg
ggactgactgcttctgctctggttctcgactacatgaggagatccaggaaaaaaggtttt
tatcagctgccccagtccgccccgtcttcagcatga
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