Girardinichthys multiradiatus (darkedged splitfin): 124878004
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Entry
124878004 CDS
T08099
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04020
Calcium signaling pathway
gmu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124878004 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124878004 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124878004 (grin1b)
Ion channels [BR:
gmu04040
]
Ligand-gated channels
Glutamate (ionotropic)
124878004 (grin1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
124878004
NCBI-ProteinID:
XP_047237679
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Position
12:complement(52567127..52667591)
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AA seq
938 aa
AA seq
DB search
MEMRSVLLLAVLHCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSQDTNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAH
IADAVGVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNQQKTGRVVQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTRL
KIVTIHQEPFVYVKPTKSDGMCKEEYTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGFCI
DLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAVPEPQTSFRS
ITSTSDLKHRMAPGDATPYPTDITGQLNLSDPSVSTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcgcagcgtgctgctgcttgccgttctgcactgctgctcggtggcgctgtgc
ggctgcgaacctcggctggtcaatgtgggcgctgtcctgagtcagaaacgctacgagcag
gtgttcaaggaggcggtgagtcaggccaacgctctgtacggcaaggacaagttcaagatg
aatgccatctctgtcacgcacaagcctaacgccatccagatggccctgtccgtctgtgag
gacctcatctccaaccaggtgtatgccatcctggtcagccatccaccgcagtccaacgac
cacctgacgccgacgccggtctcctacacagccggcttctaccggatccctgtggtcggg
ctgaccacgcgcatgtccatctactctgacaagagcatccacctgtcattcctgaggacg
gtgcctccatactcccaccaggcccaggtgtggtttgacctgatgagggagttcaggtgg
aaccacatcatcctgatagtcagtgatgaccacgagggccgagccgcccagaagaagctg
gagacactgctggaggagcgtgagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcggagaaggtgctgctgttcagccag
gataccaacctaacggcgctgctgctggaggctaaggacctggaggctcgagtcatcatc
ttgtcagccagtgaggatgaagctgctgctgtgtacaaagcagcccggcagctcaacatg
actggttccggttacgtgtggctggtcggagagcgggagatgagtgggaaagctctgagc
gaagctcctgatggcctgctgggcctccagctgatcaacggcaaaaacgagtcggcccac
atcgccgacgcggtgggcgtggtggcgcagtccctgcaggagctgtttgagaaggagaac
atcacggagcctccacgaggctgtgtagggaacaccaacatctggaggaccgggccactc
tttaaacgggtgctgatgtcatcaaagtacccggacggcctgacgggacggattgagttt
aacgacgatggtgaccgccgctttgctacctacagcatcctgaaccagcaaaaaacaggt
cgagtcgtccaggttggagtcttcaacggaacgcaggttgtgatgaatcctcaaaggaag
atcatctggcctggaggagagacagagaaaccagttggataccagatgtccaccaggctg
aagattgtgaccattcatcaggagccatttgtttacgtgaagccgacgaagagcgacggg
atgtgtaaagaagagtacaccgttaacggagttctgatcaagaaggtgatctgtactgga
cccaacgggaccattccaggtcagcccattgtccctcagtgctgctacggtttctgcatc
gacctgctcatcaagttggccatgagcatgaacttcacctacgaggtccacctggtggct
gatggcaagtttggcacgcaggagcgagtgaacaacagcaacaagaaggagtggaacggg
atgatgggggagctgctgggaggcctggccgacatgatcgtggctccactcaccatcaac
aacgaacgcgctcagtacattgagttctccaaacccttcaagtaccagggcctcaccatc
ctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccagagc
acactgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttacctatta
gaccggttcagcccgttcggaaggtttaaagtgaacagtgaagaggaagaagaagatgcc
ctcaccctgtcctccgctatgtggttctcgtggggagttctgctgaactctgggatcgga
gaaggagctccgcggagcttctccgccaggatcctggggatggtgtgggcgggatttgct
atgatcattgtagcatcgtacactgccaacctggcagccttcctggtgctggaccggcct
gaggagcgcatcactggcatcaacgaccccaggctgcgtaacccatcagataaattcatc
tacgccacagtgaagcagagctcagtggacatctacttcagacggcaggtggagctgagc
accatgtaccggcacatggagaagcacaactacgagagcgccgccgaagccatccaggcc
gtccgagacaacaagctccatgccttcatctgggacagcgctgtgttggagtttgaggcg
tcgcagaagtgcgatctggtgacgacaggagagctgttcttccgctctgggttcgggatc
ggaatgaggaaagacagtccgtggaagcagaatgtctctctggcgattctcagttctcat
gagaacggcttcatggaggatctagacaagacatgggttcgataccaggagtgtgactcc
agaagcaatgctcctgccaccctcaccttcgagaacatggcaggtgtgttcatgctggtt
gctggcggcatcgtcgcagggatcttcctcatcttcatcgagatcgcctacaaacggcac
aaagacgcccgcaggaaacagatgcagctggcgtttgcagctgtgaacgtgtggaggaag
aacctgcaggataggaaaagtggtagagcagtgcccgagccccaaacctcttttaggtcc
atcacctcgacctccgacctcaaacaccgtatggcccctggggatgccacgccatacccg
acggacatcaccggccagctgaacctatcagatccctccgtcagcaccgtggtgtga
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