Glycine max (soybean): 100779047
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Entry
100779047 CDS
T01710
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gmx
Glycine max (soybean)
Pathway
gmx03020
RNA polymerase
gmx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100779047
09124 Replication and repair
03420 Nucleotide excision repair
100779047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100779047
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100779047
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100779047
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100779047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
100779047
NCBI-ProteinID:
XP_003556247
UniProt:
I1NDC0
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All DBs
Position
20:1990652..1994438
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AA seq
320 aa
AA seq
DB search
MEGGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD
VTSKDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAK
WSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYT
YDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLS
EDTVEADDQFGELGAHMRGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagtctcctacgcgcgcatgcctcgtgtcaaaatccgcgagctgaaggac
gactacgccaagttcgagctccgcgacaccgacgcgagtatagccaacgcgctgcggcgc
gtgatgatcgcggaggtgccgacggtcgccatcgacctcgtggagatcgaggtcaactcg
tcggtgctcaacgacgagttcatcgcgcacaggctcggcctcattcccctcacgagcgag
cgcgccatgtccatgcgcttctcacgtgactgcgatgcctgcgacggtgacggacagtgc
gagttttgctccgtcgagtttcatcttagggtaaagtgcatgaccgatcagaccctcgat
gttacgagcaaggatctctacagttctgaccctactgtgagtcccgttgatttctctgac
ccctctgccactgactccccagacaacaacagagggattatcattgtgaagttgagacgc
ggacaagagctgaagctgagagcgattgctaggaaggggattgggaaggatcatgctaaa
tggtcacctgctgcaactgtcactttcatgtatgaaccagagattcatataaatgaggat
ttgatggagaccttgactctggaagagaaaagggaatgggttgacagtagtccaacccgt
gtctttgaaattgatccagtgacacaacaggtcatggtggttgatgctgaggcatacaca
tatgatgacgaggtgcttaagaaagcagaagctatgggcaagcctgggcttgtagaaatc
attgcgaggcaggatagcttcatattcactgttgagtctaccggagcagttaaagcttct
caattggttctaaatgccatagaaattctcaagcagaagttggatgctgtgcggctatct
gaagatacagtggaggccgatgatcagtttggtgagctaggtgcacatatgcgaggaggt
tga
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