Glycine max (soybean): 100788022
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Entry
100788022 CDS
T01710
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100788022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100788022
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100788022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Patatin
Motif
Other DBs
NCBI-GeneID:
100788022
NCBI-ProteinID:
XP_006585387
UniProt:
A0A0R0IMY2
LinkDB
All DBs
Position
8:complement(12731087..12764420)
Genome browser
AA seq
2088 aa
AA seq
DB search
MPLFLSDEEFAWCSGDGSAVAAKADAFIRGLFNELDTVRSKAHAADINAEQNCLLIEQKY
LSLTAEFSKLESNIAELQSSLDQRLREIDEVQSQNHRIKLEAVEKDREIERLRTEVAELH
KSKRQLLELNEQKDLELSEKNATMKSYLDKIVRLSENAAHKEARLSEVEAELALCRAACT
RFEQEKEIVERQNSWLNEELNAKVNIVFELRRKHTEFEADMTSKLADMQRQFGESSKSLL
WNEDRVRELEIKLKSVQEELISAKDVAAANEEQLSAELSTVNKLNELYKESSEEWSKKAA
DLEGVIKAIESRLKQVEDDYKEKLEKELSARKQVEKEATDLKEKLEKCEAEIETRKKTDG
VNNLPLSSFATEPWMEPIEADTMVEENSLLLVPRIPVGVSGTALAASLLRDGWSLAKMYA
KYQEAIDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDERVEHEKMADSYSLMNQKLRK
SLNENSNLEKTIQELKADLKRHERDYNLVQKETDDLRKQVTVLLKECRDIQLRCGSMGYD
IVDDASNIVSRTSTETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSISGHIENQEVEF
KEKLEMELKKHTEESASKVAAVLQRAEEQGHMIEALHASVAMYKRLYEEEHNLHLSHTHS
SEALAAVAEVGRNNLKTSIESSQEAAKKSLEKAAERVRCLEDDLAKSRSEIIVLRSERDK
SALEANFAREKLNDIMKEFEHQKTEAKGILERNVEFSQLVVDYQRKLRESSESLIAAEEL
SRKLTLELSVLKQEKEVISNSEKRASNEVRSLSERVQRLQASLSTIQSTEEVRGEARAAE
RVKQEEYIKKLEREWAEAKQELNEERENVRRFTSDRDQTLKNSLRQVEDMSKELANALRA
VASAESRAAVAEVKLSGLQRKMGSTDDKLVEIGGVSGPSTLSSDEVVAELQKAKDEIEKW
KEEAHANKAHMLQYKSIAEVNEDALKEIEKAHEKFKIEADNGKKDLESELKSLRDKMLEL
ENKSSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISAMEIQISGLKEKLDRE
HQKWRAAQTNYERQVVLQSETIQELTKTSEALALLQEEASELRKLANTQKIENNELKAKW
EDEKVQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIQWAEKERNAAGISSGSSSADAFG
DAGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQHESALKAAESAHASLETERAKSRSF
LFTEEEFKALQLQVRELNLLRESNMQLREENKHNFEECQKLRELAQKVRAETENLENLLR
EREIELQRHKKEIGTLKMEKDNLNKKVSELLERSKNVDVEDYDRVKKLAREIQDKLRERD
ARIEELGKSLSEKQDSVSCLEKDLSNCRLELAEREKRINDILHNEANLKLDSEKHRKLLA
QFKKRIDVLSREKEDLGKENQQLSRQLDEIKQGKRSTCDTTGEQAMKEEKDTRIQILEKH
LERQRDELKKEKEESRLERSRRLKTEKAIKDSYNNVEQEKIKLIIEIERYKESLKRLSDE
VEKLKIVIGNLPEGSNVVQLLSGSNVDDFAAPYISAVESFEKEAQSVFRELGGRGNLGDA
ATITDGSAAATGSLVHPQSQGIASLAAPGVSGLPPKATGESEKRLALPKASVETRRTGRR
LVRPKLLEKSEKRPEELQGGDTEMSDAEGPGGKPGQSSDTDTSNVVQSSQQLARKRVAPT
STSELREESVAPGEKSSDVLKKSKGSESLEENTEEQPAAILEFTGSHPVTEELFDSSDMP
QCQNEEVGEAQNEDGEIAVGNDEESKDPRHLDGTGQEELQADKTGTLEENQDQSAETKVL
SDEMQRNQTDPDNQQSTLAPSGEREEGELMPDTGDLEGASDLSNIAENQESREGQSESAA
TPERSPARVDDDALEAGEINSPELSSDDKNDEGDLVEEAADGSDKLIDVNEPISAESDQV
AEPVASETATSTSTVAESSSSKVNLPVPRQGTPSAPAETEETKQASPVGSTSTTINLSER
ARERAQMRQAGLVSSTLRGRGRGGAPRGRVGRGRGVVRRPPPPPGSDQ
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttcctctccgacgaggagttcgcgtggtgctccggtgacggctctgccgtg
gccgcgaaggccgacgccttcatccgcggcctcttcaacgagctcgacaccgtccgctcc
aaggcccacgccgccgacatcaacgccgagcagaactgccttctcatcgagcagaagtat
ctctccctcaccgccgagttctccaaactcgagtcgaacatcgccgaacttcaatcctct
ctcgatcagcgcctccgcgaaatcgacgaggtgcaatcgcagaaccaccgaatcaaattg
gaagcggttgagaaagatagggagatagagcggttgaggacggaggtggcggagttgcac
aagtcgaagaggcagttgcttgagttgaacgagcagaaggatttggagctaagtgagaag
aatgcaaccatgaagagttatcttgataagattgttcgtttaagtgaaaatgctgctcat
aaggaggcacggttgagtgaagttgaggcagaattggcactgtgccgggctgcttgcact
cgctttgaacaggagaaggagattgttgagaggcagaattcgtggctcaacgaggagttg
aatgctaaagttaacattgtttttgagctgcgcagaaagcacactgaatttgaagctgat
atgacctccaaacttgcagatatgcagaggcagtttggtgaaagttctaaatctctactg
tggaatgaggatagagtgagggagcttgaaattaagcttaaatctgtgcaggaggaatta
atttctgctaaagatgttgctgcagcgaacgaagaacaattatctgctgaactttccact
gttaataagcttaatgagctatataaagagagttccgaggaatggtcaaaaaaagcagca
gacctagagggtgtgataaaagcaatagagtcacgcctaaagcaagttgaagatgattat
aaagagaaacttgagaaggaattatctgccagaaaacaagttgaaaaggaggccactgat
ttaaaagaaaagcttgagaagtgtgaagctgaaattgagacaaggaagaagactgatgga
gtgaataatcttcctcttagcagttttgctactgaaccgtggatggaaccaattgaagct
gataccatggttgaggaaaatagcttgctactagtcccaagaattcctgttggagtttct
ggaactgcattggctgcttcacttctgcgagatgggtggagtttggccaaaatgtatgca
aaatatcaagaggcaattgatgcattgaggcacgaacaattgggaaggaaggagtcagaa
gcagtactgcaacgggttctatacgagttagaggagaaagcggaagcaattatagatgaa
agagtggaacatgaaaaaatggctgactcatactccttgatgaaccaaaaattgcgaaaa
tccctgaatgaaaattccaacttagagaaaaccatccaggaactgaaggctgatctgaaa
aggcatgaacgggattataatcttgtccagaaagaaactgatgaccttcgaaaacaggtg
acagtacttctgaaggaatgccgagacatacaacttcgttgtggctcaatgggatatgat
attgttgatgatgcttcaaatattgtttcaaggacaagtacagagactgaagctgaacat
gtcatatccgagcacctcttgaccttcaaggacatcaacggactagttgagcagaatgtt
caacttagaagccttgtacgtagcatttctggccatattgaaaatcaggaggtggaattc
aaggagaagcttgaaatggaactcaaaaagcatactgaagaatctgcttcaaaagttgca
gctgttctgcagagagcagaagagcaaggccacatgattgaagcgcttcatgcatctgtt
gcgatgtataagaggttatatgaggaggagcataatcttcatttatctcatacccattcc
tcagaagctcttgcagctgttgcggaagttggaagaaacaaccttaagacttcaattgaa
agttcacaggaggctgctaagaagtcccttgaaaaagctgctgagcgtgtgagatgcctt
gaggatgatttagcgaagtctaggagtgagattattgtattacgatcagaacgtgacaag
agtgcacttgaagcaaattttgctagagagaaacttaatgacattatgaaagaatttgaa
catcagaaaactgaagccaaaggcattttagaaagaaatgttgagttttctcagctggtt
gttgactaccaacgaaaattgcgtgaaagctctgagtcattgattgctgctgaggagctt
tcgcggaaacttactttggagctgtcagttttaaagcaagaaaaggaagtcatatcaaat
tctgaaaaaagagcatccaatgaagttcgcagtttgtctgaaagggtgcagcgtttgcag
gctagtttgagtaccatacagagtactgaggaagttcgaggggaagcaagagctgcagag
agggttaagcaagaagaatatataaagaaattggagagggaatgggctgaggccaagcaa
gagttaaatgaagagcgggaaaatgtgcggagattcacatcagatcgggaccagacccta
aaaaattctctgagacaggttgaggatatgagcaaagagttagctaatgcattgcgtgca
gttgcatctgctgaatcaagggctgctgtggctgaggtaaaactctctggtcttcaaaga
aagatgggttccacggatgacaagcttgtcgaaataggtggagtgagtggaccttccact
ttatcaagtgatgaggttgttgctgaattgcaaaaggcaaaggacgaaattgaaaagtgg
aaagaggaagctcatgccaacaaagcccacatgctgcagtataagagcattgctgaggtg
aatgaagatgcactgaaagagatagaaaaggcgcatgagaagtttaaaatagaggctgac
aatggaaagaaagatctggaatctgaacttaagtcactaagagacaagatgttagagctt
gaaaataaatcttctttgaaatatgaagaagttgcttctgaaactgtgggaaaggaagag
gctcttacatctgctatggctgaaatcacaaatcttaaagaagaaattttaaccaaatct
tctcaaatttctgcaatggaaattcagatctcgggtttaaaagaaaaactggacagggaa
catcagaaatggcgggcagctcaaaccaattatgaaagacaggttgttctccagtccgaa
actattcaggagttgacaaaaacatctgaagcactagccttgctgcaggaggaggcatct
gagttacggaaactagccaatactcagaaaattgaaaataatgaactaaaggctaagtgg
gaagatgagaaggtacaactagagaagtctaggaatgatgctgagaagaaatacaatgaa
atcaatgaacagaataaaatactacatagtcaacttgaggcttttcatattcaatgggcc
gagaaggagcgtaacgctgctggtatttcatctggaagtagtagtgcagatgcctttggt
gatgctggtcttcaaaacgtgattaattatctcagacgttccaaagaaattgcagaaaca
gaagtttcattgttaaaacaagagaagctgcgactacagtcacagcatgagagtgctttg
aaggcagcagagtctgcacatgcatcactagaaactgagcgtgcaaaatcaagatcattt
ttgtttaccgaagaggagttcaaagcattgcagcttcaggtcagagaattgaacttactt
cgtgagagtaacatgcagctcagggaagaaaataaacacaattttgaggaatgtcagaaa
ttgcgtgaactagcacaaaaggttagagctgagacagagaacctagagaatctcctgagg
gaaagagaaattgagcttcagcgccataagaaagaaattggaacattaaaaatggaaaaa
gataatctcaataagaaggtttctgagttgcttgaaaggagtaaaaatgttgatgttgag
gattatgatcgagtgaagaaacttgctagagaaatccaggataaactaagagagagagat
gctcggattgaggaacttggtaaaagtctatcagaaaagcaggattctgtttcatgccta
gagaaagatctttcaaactgccgattggagctagcagagagagagaagagaattaatgac
attctgcataatgaggctaacctaaaacttgattcggagaagcataggaaactgctggct
cagtttaagaagaggattgatgttttgtcaagggaaaaggaagacctagggaaagagaac
caacaactttctaggcaattagatgaaattaaacaagggaaaaggtcaacatgtgataca
acaggtgaacaagcgatgaaggaggaaaaggacacaagaatacagattctggagaaacat
ctggagagacagagagatgaattaaagaaggagaaggaagagagtcgtttagagagaagt
agacgactgaagactgaaaaggccataaaggactcttacaacaatgttgaacaggagaaa
ataaaattgattattgaaattgagaggtataaggagtctctgaaaaggttatctgatgaa
gttgaaaagcttaagattgttattggcaatcttcctgagggttcaaatgtggttcaactt
ctttctggatccaatgtcgatgactttgctgctccttacatatctgctgtggaaagtttt
gaaaaggaagctcagtcagtatttcgggagcttggaggtcgcggtaatcttggagatgca
gcaacaattacggatggttcagccgctgctacaggttctcttgtacatcctcaatcccaa
ggcattgcatctttagcggcccctggagttagcggtttaccacctaaagccactggagaa
agtgagaaaagacttgcattacccaaagctagtgttgaaactcgtcgaacaggtaggaga
ttggtcaggcctaaactactagagaaaagtgagaaaagacctgaggagcttcaaggtggt
gacacagaaatgtctgatgctgaaggacctgggggcaagcctgggcagtctagtgacaca
gatactagtaatgttgttcaatcatctcaacaattggctcgtaagcgtgttgctcctacc
tccacttctgaattacgtgaagaatcagttgcacctggtgagaagagctctgatgtcttg
aagaagtcaaaaggatctgagtccctagaagagaatacagaagaacaacctgctgcaatt
ctagaatttactggcagccaccctgtcactgaagaattatttgatagcagtgacatgccc
caatgccaaaatgaggaggttggtgaagctcaaaatgaagatggtgaaattgctgtcggg
aatgatgaggaatccaaagatccacggcacttggatggtactggtcaagaggaattacaa
gctgacaaaactggaactttagaagagaatcaagatcaatctgctgaaacaaaagtgctg
tctgatgagatgcagaggaatcagacagacccagacaatcagcagtcaacattggcgccc
agtggtgagagagaagagggagaattgatgccagatactggagatctagagggtgctagt
gatttgtctaacattgcggaaaaccaagaatctcgggaaggtcaatctgagtctgctgca
actcctgaacgttccccagctagggttgatgatgatgctctagaggctggtgagattaat
tctcctgagctttcaagtgatgataagaatgatgagggtgacttggtagaggaggctgct
gatggttctgacaagttgattgatgtcaacgaaccaatatcagctgagagcgatcaagtg
gctgagcctgttgcgagtgagactgctacttcgacaagcactgttgcagagagtagctcc
tctaaagtgaacttacctgttccaaggcaagggacccctagtgcccccgctgaaacagaa
gagacaaagcaggcatcacctgttggtagtacttcaacaaccataaatttatcagagcga
gcacgggaaagggctcaaatgagacaggctgggttggtttcttctacccttagaggtcgt
ggaagaggcggtgctccccgtggtcgagttggtcgaggtaggggagtagtacgccgacca
cctccaccacctggcagtgatcaatga
DBGET
integrated database retrieval system