Glycine max (soybean): 100811882
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Entry
100811882 CDS
T01710
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100811882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100811882
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100811882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
100811882
NCBI-ProteinID:
XP_006598228
UniProt:
I1MJF7
LinkDB
All DBs
Position
15:51950989..51987103
Genome browser
AA seq
2084 aa
AA seq
DB search
MPLFLSDEEFARCSGDGAAVAAKADAFIRGLLHELDTVRAKADAADINAEQNCSLIEQKY
LSLTAEFSKLESNVAELQSSLDQRLREIAEVQSQNHRIQLQLVEKDREIERLRTEVAELH
KSKRQLLELNEQKDLELSEKNATMKSYLDKIVRLSENAAHKEARLSEVEAEMARCRAACT
RFEQEKEIVERQNSWLNEELNAKVNIVFELRRKHTEYEADMTSKLADMQRQFGESSKSLQ
WNKDRVRELEMKLKSVQEELISAKDVAAANEEQLSAELSTVNKLNELYKESSEEWSKKAA
DLEGVIKAMESHQKQVEDDYKEKLEKELSARKQVEKEATDLKERLEKCEAEIETRKKTDG
VNNLPLSSFATESWMESIEADSMVEENSLLVPRIPVGVSGTALAASLLRDGWSLAKMYAK
YQEVVDALRHEQLGRKESEAVLQRVLYELEQKAEAILDERVEHDKMADAYSLMNQKLQNS
LNENSNLEKTIQELKADLKRRERDYNLVLKETDDLQKQVTVLLKECRDIQLRCGSMGYDI
VDDASNIASRTSRETEAEDVISEHLLTFKDINGLVEQNVQLRSLVRSISGHIENQEVEFK
EKLEMELKKHTEESASKVAAVLQRAEEQGHMIEALHASVAMYKRLYEEEHNLHLSHTHSS
EALAAVAAVGRNNIKTSIESSQEAAKKSLEKAAERVRCLEDDLAKSRSEIIVLRSERDKS
ALEANFAREKLNDIMKEFEHQKTEAKGILERNIEFSQLVVDYQRKLRESTESLIAAEELS
RKLSMELSVLKQEKEVISNAEKRASDEVHSLSARVQRLQASLSTIQSTEEVREEARAAER
VKQEEYIKKLEREWAEAKQELNEERENVRRFTSDRDQTLKNSLRQVEDMSKELANALRAV
ASAESRAAVAEAKLSGLQRKMGSTDDKLVEIGGVSGSSTLSSDEVVAELQKAKDEIEKWK
EEAHANKAHMLQYKSIAEVNEDALKEIEKAHEKFKTEADNGKKVLESELNSLREKMLEIE
NESSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISAMEIQISGLKENLDREH
QKWRATQTNYERQVVLQSETIQELTKTSEALALLQEEASELRKLANTQKIENNELKTKWE
DEKAQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIQWAEKERNAAGISSGSSSADAFGD
AGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQLETALKAAESAHASLETERAKSRSFL
FTEEEFKALQLQVREMNLLRESNMQLREENKHNFEECQKLRELAQKVRAETENLENLLKE
REIKLDGHTKEIETLKMEKDHLNKKVTELLERSKNVDVEDYDRVKKLAKEIQDKLRERDA
RIEEIGKSLSEKQDSVSSLEKDLSNCRLELAEREKRINDILHNEANLKLDSEKHRKLLAQ
FKKRIDVLSREKEDLGKENQQLSRQLDEIKQGKRSTSDTTGEQAMKEEKDTRIQILEKHL
ERLRDELKKEKEESRLEKSRRLKTEKAIKDSYNNVEQEKIKSINEIERYKESLKRLSDEV
EKLKIVIGNLPEGSNVVQLLSGSNVDDFAAPYISAVESFEKEAQSVFRELGGRGNLGDAA
TVTDGSAAATGSLVHPQPQGITFSAAPGASGLPPKASGESEKRLALPKASVETRRAGRRL
VRPKLLRPEELQGGDTEMSDAEGPGGKPGPSSDTETSSVVQSSQQLARKRVAPTSTSELR
EESVAPGEKSSDVLKKSKGSESPEENTEEQPAATLEFTGSHPVTEELLDSSDMPQGQNEE
VGDAQNEDGEIAVGNDEESKDPQNLDVTGQEELQGDKTGTLEENPDQPVDAKMLSDEMQR
DQTDPDNQQSTLAPSGEREEGELLPDIGDLEGASDLSNIAENQESREGLSESAATPERSP
ATVDDDALEAGEINSPELSSDDKNDEGDSVEDAADASDKLMDVNEQISAESDQVAEPTPV
ASEGATLTSSVVESSSSKVNLPVPRQGTPNAPAETEETKQASPIGSTSTTIILSERARER
AQMRQAGLVSSTLRGRGRGGAPRGRVGRGRGVVRRPPPPPGSDQ
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttcctctccgacgaggagttcgcgcggtgctccggcgacggcgccgccgtg
gccgcgaaggccgacgccttcatccgcggcctcctccacgagctcgacaccgtccgcgcc
aaggccgacgcagccgacattaacgccgagcagaactgctccctcatcgagcagaagtac
ctctccctcaccgccgagttctccaaactcgagtcgaacgtcgccgaacttcaatcctct
ctcgatcagcgcctccgcgaaatcgccgaggtgcaatcgcagaaccatcgaatccaattg
caattggtcgagaaagatagggagatagagcggttgaggacggaggttgcggagttgcac
aagtcgaagaggcagttgcttgagttgaacgagcagaaggatttggagctaagtgagaag
aatgcaaccatgaagagttatcttgataagattgttcgtttaagtgaaaatgctgctcat
aaggaggcgcggttgagtgaagttgaggcagaaatggcacggtgccgggctgcttgcact
cgctttgaacaggagaaggagattgttgagaggcagaattcttggctcaacgaggagttg
aatgctaaagttaacattgtttttgagctgcgcagaaagcacacagaatatgaagctgat
atgacttccaagcttgcagatatgcagagacagtttggtgaaagctctaaatctctacag
tggaataaggatagagtgagggaacttgaaatgaagcttaaatctgtgcaggaggaatta
atttctgctaaagatgttgctgcagccaacgaagaacaattatctgctgaactctccact
gttaataagcttaatgagctatataaagagagttccgaggaatggtcaaaaaaagctgca
gacctagagggcgtgataaaagcaatggagtcacaccaaaagcaagttgaagatgattat
aaagagaaacttgagaaggaattatctgccagaaaacaggttgaaaaggaggccactgat
ttaaaagaaaggcttgagaagtgtgaagctgaaattgagacaaggaagaagactgatgga
gtgaataatcttccccttagcagttttgctactgaatcgtggatggaatcaattgaagcc
gatagcatggttgaggaaaatagcttgctagtcccaagaattcctgttggagtttctgga
actgcattggctgcttcacttctgcgagatgggtggagtttggccaaaatgtatgcaaaa
taccaagaggtggttgatgcattgaggcacgaacaattgggaaggaaggagtcagaagca
gtactgcaacgggttctatatgagttagagcagaaagcagaagcaattttagatgaaaga
gtggaacatgacaagatggctgatgcatactccttgatgaaccaaaaattgcaaaactcc
ctgaatgaaaattccaacttagagaaaaccatccaggaactaaaggctgatctgaaaagg
cgtgaacgggattataatcttgtcctgaaagaaactgatgaccttcaaaaacaggttaca
gtacttctgaaggaatgccgagacatacaacttcgttgtggctcaatggggtatgatatt
gttgatgatgcttcaaatattgcttcaaggacaagtagagagactgaagctgaagatgtc
atatcagagcaccttttgaccttcaaggacattaacggactagttgagcagaatgttcaa
cttagaagccttgtacgtagtatttctggccatattgaaaatcaggaagtggagttcaag
gagaagcttgaaatggaactcaaaaaacatactgaagaatctgcttctaaagttgcagct
gttctgcagagagcagaagagcaaggtcacatgattgaagcgcttcatgcatctgttgcg
atgtataagaggttgtatgaggaggagcataatcttcatttatctcatacccattcctca
gaagctcttgcagctgttgcggcagttggaagaaacaacattaagacttcaattgaaagt
tcacaggaggctgctaagaagtccctggaaaaagctgctgagcgtgtgagatgccttgag
gatgatttagcaaagtctaggagtgagattattgtattacgatcagaacgtgacaagagt
gcacttgaagcaaattttgctagagagaaacttaatgacattatgaaagaatttgaacat
cagaaaactgaagcaaaaggcattttagaaagaaatattgagttttctcagctggttgtt
gactaccaacgaaaattgcgtgaaagcactgagtcattgattgctgctgaggagctttcg
cggaaactttctatggagctgtcagttttaaagcaagaaaaggaagtcatatcaaatgct
gaaaaaagggcatccgatgaagttcacagtttgtctgcaagggtgcagcgtttgcaggct
agtttgagtaccatacagagtactgaggaagttcgagaggaagcaagagctgcagagagg
gttaagcaagaagaatatataaagaaattggagagggaatgggctgaggccaagcaagag
ttaaatgaagagcgggaaaatgtgcggagattcacatcagatcgggaccaaacactaaaa
aattctttgagacaggttgaggatatgagcaaagagttagctaatgcattgcgtgcagtt
gcatctgctgaatcaagggctgctgttgctgaggcaaaactctctggtcttcaaagaaag
atgggttccacagatgacaagcttgttgaaataggtggagtgagtggatcttccactttg
tcaagtgatgaggttgttgctgaattgcaaaaggcaaaagacgagattgaaaagtggaaa
gaggaagcgcatgccaacaaagctcacatgctgcagtataagagcattgctgaggtgaat
gaagatgcattgaaagagatagaaaaggcgcatgagaagtttaaaacagaggctgacaat
ggaaagaaagttttggaatctgaacttaactcacttagagagaagatgttagagattgaa
aatgaatcttctttgaaatatgaagaagttgcttctgaaactgttggaaaggaagaggct
cttacatctgctatggctgaaatcacaaatcttaaagaagaaattttaaccaaatcttct
caaatttcagcaatggaaattcagatctcaggtttaaaagaaaacctggacagggagcat
cagaaatggcgggcaactcaaaccaattatgaaagacaggttgttctccagtccgaaact
attcaggagttgacaaaaacatctgaagcactagccttgctgcaggaggaggcatctgaa
ttacggaaactagccaatactcagaaaattgaaaataatgaactaaagactaagtgggaa
gatgagaaggcacaactagaaaagtctaggaatgatgctgagaagaaatacaatgaaatc
aatgaacagaataaaatactacatagccaacttgaggcttttcatattcaatgggccgag
aaggagcgtaatgctgctggtatttcatctggaagtagtagtgcagatgcctttggtgat
gctggtcttcaaaacgtgattaattatctcagacgttccaaagaaattgcagaaacagaa
gtttcgttgttaaaacaagagaagctgcgattacagtcacagcttgagactgctttgaag
gcagcagagtctgcacatgcatcactagaaactgagcgtgcaaaatcaagatcatttttg
tttaccgaagaagagttcaaagcattgcagcttcaggtcagagaaatgaacttacttcgt
gagagtaacatgcagctcagggaagaaaataaacacaattttgaggaatgtcagaaattg
cgtgaactggcacaaaaggttagagctgagacagagaacctagagaatctcctgaaggaa
agagaaattaagcttgatggccatacgaaagaaattgaaaccctaaaaatggaaaaagat
catctcaataagaaggttactgagctgcttgaaaggagtaaaaatgttgatgttgaggat
tatgatcgagtgaagaaacttgctaaagagatccaggataaactaagagagagggatgct
cggattgaggaaattggtaaaagtctatcagaaaagcaggattctgtttcatccctagag
aaagatctttcaaactgccgattggagcttgcagagagagagaagagaattaatgacatt
ctgcataatgaggctaacctaaaacttgattcagagaagcataggaaactgctggctcag
tttaagaagaggattgatgttttgtcaagggaaaaagaagacctaggaaaagagaaccag
caactttctaggcaattagatgaaattaaacaagggaaaaggtcaacaagtgatacaact
ggtgaacaagcgatgaaggaggaaaaggacacaagaatacagattctggagaaacatctg
gagagactgagagatgaattaaagaaggagaaggaagagagtcgtttagagaaaagtaga
cgactgaagactgaaaaggccataaaggactcttacaacaatgttgaacaggagaaaata
aaatcgattaatgaaattgagaggtacaaggagtctctgaaaaggttatctgatgaagtt
gaaaagcttaagattgttattggaaatcttcctgagggttcaaatgtggttcaacttctt
tctggatccaatgttgatgactttgctgctccttacatatctgctgtggaaagttttgaa
aaggaagctcagtcagtatttcgtgagcttggaggtcgcggtaatcttggagatgcagca
acagttacggatggttcagcagctgctacaggttctcttgtccatcctcaaccccaaggc
attacattttcagcggcccctggagctagtggtttaccacctaaagccagtggagaaagt
gagaaaagacttgcattacccaaagctagtgttgaaactcgtcgagcaggtaggagattg
gtcaggcctaaactactaagacctgaggagctacaaggtggtgacacggaaatgtctgat
gccgaaggaccagggggcaagcctgggccatctagtgacactgaaactagtagtgttgtt
caatcatctcaacaattggctcgtaagcgtgttgctcctacctccacttctgaattacgt
gaagaatcagttgcacctggtgagaagagctccgatgtcttgaagaagtctaaaggatct
gagtccccagaagagaatacagaagaacaacctgctgcgactctggaatttactggcagt
caccctgtcactgaagaattattggatagtagtgacatgccccaaggccaaaatgaggag
gttggtgacgctcaaaatgaagatggtgaaattgctgttgggaatgatgaggaatccaaa
gatccacagaacttggatgttactggtcaagaggaattacaaggtgacaaaactggaact
ttagaagagaatccggatcaacctgttgatgcaaaaatgctgtctgatgagatgcagagg
gatcagacagacccagacaaccagcagtcaacattggcgcccagtggtgagagagaagag
ggagaattgttgccagatatcggtgatctagagggtgctagtgatttgtctaacattgcc
gaaaaccaagaatctcgggaaggtctatctgagtctgctgcaacccctgaacgttctccg
gctacggttgatgatgatgctctagaggccggtgagattaattctcctgagctttcaagt
gatgataagaatgatgagggtgactcggtagaggatgctgctgatgcttccgacaagttg
atggacgtcaatgaacaaatatcagccgagagcgatcaggtggccgagcctacacctgtg
gcaagtgagggtgctactttgacaagcagtgttgtagagagtagctcctctaaagtgaac
ttacctgttccaaggcaagggacccccaatgcccctgctgaaacagaagagacaaagcag
gcatcacctattggtagtacttcaacgactataattttatcagagcgagcacgggaaagg
gcccaaatgagacaggctgggttggtttcttctacccttagaggtcgtggaagaggcggt
gctccccgtggtcgagttggtcgaggtaggggagtagtacgccgaccacctccaccacct
ggcagtgatcaatga
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integrated database retrieval system