KEGG   GENOME: Mycobacterium tuberculosis variant africanum
Entry
T01575            Complete  Genome                                 
Org code
maf
Name
Mycobacterium tuberculosis variant africanum GM041182 (Mycobacterium africanum GM041182)
Annotation
yes
Taxonomy
TAX:572418
  Lineage
Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
Data source
GenBank (Assembly: GCA_000253355.1 Complete Genome)
BioProject: 68095
Original DB
Sanger
Keywords
Human pathogen
Disease
H00342  Tuberculosis
Comment
Isolated in The Gambia in 2004 from a 27 year old HIV uninfected male patient with 3+ smear positive pulmonary tuberculosis.
Chromosome
Circular
  Sequence
GB:FR878060
  Length
4389314
Statistics
Number of nucleotides:       4389314
Number of protein genes:        3830
Number of RNA genes:              50
Created
2011
Reference
PMID:22389744
  Authors
Bentley SD, Comas I, Bryant JM, Walker D, Smith NH, Harris SR, Thurston S, Gagneux S, Wood J, Antonio M, et al.
  Title
The genome of Mycobacterium africanum West African 2 reveals a lineage-specific locus and genome erosion common to the M. tuberculosis complex.
  Journal
PLoS Negl Trop Dis 6:e1552 (2012)
DOI:10.1371/journal.pntd.0001552
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