Gordonia sp. YC-JH1: CXX93_17980
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Entry
CXX93_17980 CDS
T05256
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00020
Citrate cycle (TCA cycle)
goc00640
Propanoate metabolism
goc00660
C5-Branched dibasic acid metabolism
goc01100
Metabolic pathways
goc01110
Biosynthesis of secondary metabolites
goc01120
Microbial metabolism in diverse environments
goc01200
Carbon metabolism
Module
goc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
goc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CXX93_17980
00640 Propanoate metabolism
CXX93_17980
00660 C5-Branched dibasic acid metabolism
CXX93_17980
Enzymes [BR:
goc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CXX93_17980
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
CPSase_L_D2
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AUH69850
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Position
complement(3878329..3879492)
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AA seq
387 aa
AA seq
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MDLFEYQAKELFAKHGVPTTPGRVTDTAADARAIAEEIGKPVMIKAQVKVGGRGKAGGVK
YAATPDDAQTHAENILGLDIKGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVE
GGMEIEEVAATKPDRLARIAVDAVKGVDLAFAREIAEKGHLPAEVLDAAAVTIQKLWEVF
VAEDALLVEVNPLVRTPDDQILALDGKVTLDGNAEFRQPGHAEFADKDATDPLELKAKEN
DLNYVKLDGQVGVIGNGAGLVMSTLDVVAYAGENHGGVKPANFLDIGGGASAEVMAAGLD
VILGDEQVKSVFVNVFGGITACDAVANGIVGALAKLGDAASKPLVVRLDGNKVEEGRKIL
AEANHPLVTLADTMDSGADKAAELANQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttcgaataccaggcgaaggaactgttcgccaagcatggggtacccaccaca
ccaggtcgggtgactgacactgccgccgatgcgcgggcgatcgccgaggaaatcggcaag
cccgtgatgatcaaggcgcaggtcaaggtcggcggccgcggtaaggccggtggcgtcaag
tacgccgcaacccctgatgacgcacagacgcacgctgaaaacatcctcgggctcgatatc
aagggccacgttgtcaagaagctcctcgttgccgaggccagtgacatcgccgaggagtac
tacatctccttcctgctcgatcgcgccaaccgcacctacctggccatgtgctcggtcgag
ggcggcatggagatcgaagaggtcgccgcaaccaagccggaccggctggctcgcatcgcc
gtcgacgcggtcaagggcgtcgacctggcgttcgcgcgcgagatcgccgagaagggccat
ctgcccgccgaggtcctcgacgcggccgccgtgaccattcagaagctgtgggaggtcttc
gtcgccgaagacgcactgctcgtcgaggtcaacccgttggtgcgcacgccggacgatcag
atcctggcgctcgacggcaaggtgacgctggacggcaacgccgagttccggcagccgggc
cacgccgagttcgcggacaaggacgccaccgatccgctcgagctcaaggccaaggagaac
gacctcaactacgtcaagctcgacggtcaggtcggcgtcatcggcaacggtgcgggtctg
gtcatgtcgaccctcgacgtggtcgcctacgccggtgagaaccacggcggcgtgaagccg
gccaacttcctcgacatcggcggcggtgcgtccgccgaggtgatggcggccggtctggac
gtcattctcggcgacgagcaggtcaagagcgtcttcgtgaacgtcttcggcggcatcacc
gcctgtgacgcggtcgccaacggcatcgtcggcgcgctcgccaagctgggcgacgccgcc
agcaagccgctggtggtccgtctcgacggcaacaaggtcgaggagggtcgcaagatcctg
gccgaggccaaccacccgctggtgaccctggcggacaccatggactcgggtgccgacaag
gccgctgagctggcgaaccagtag
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