Gemmata obscuriglobus: C1280_33250
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Entry
C1280_33250 CDS
T05475
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gog
Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gog03009
]
C1280_33250 (rimO)
Enzymes [BR:
gog01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C1280_33250 (rimO)
Ribosome biogenesis [BR:
gog03009
]
Prokaryotic type
ribosomal protein modification factors
C1280_33250 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
FlgO
Motif
Other DBs
NCBI-ProteinID:
AWM41392
UniProt:
A0A2Z3HAC3
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All DBs
Position
8054028..8055431
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AA seq
467 aa
AA seq
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MSVKSLPLSADKSPAAGAATKGNYAFISLGCPKNTVDSERMLGKLAQDGYSLQPDAAGAD
VVIVNTCGFIEPARQESLAVIREMLELKKAGKVGSVVVAGCMAERQKDVLLEQVPEVDQI
VGVFGREEIAAVVDRAVSQRDEQRSLFRPAPVRALEDTARLRITPRHFAYLKVSEGCDRL
CTYCAIPKMRGKHVTKPIEEVIREARELAADGVRELIIVAQDTTYYGMDLYGRTRLAELL
RELDKVENIEWIRTLYAYPEHISDELIETFAGSKKIIPYLDMPLQHISDRVLKRMIRRVD
RAATEKLLYRLREKWPDLAIRTTFITGFPGETDAEFEELRDFVAQFKFERVGVFPYSLEP
GTPAEKLDGHLPEDVKQARVNAIMEVQQGVAFGWAEAQVGREHPVVIDGPDPEFANHFRG
RTYADAPEIDCAVRVKGKNLRPGDFVRAKITASDGYDLVARAIGQPW
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaagagtctcccgctcagcgctgataagtcgcccgccgcgggcgccgcgacc
aaagggaactacgccttcatctcgctgggctgccccaagaacaccgtggacagcgagcgg
atgctgggcaaactcgcccaggacgggtactcgctccagcccgacgccgccggcgccgac
gtggtcatcgtgaacacctgcgggttcatcgagccggcgcggcaggagtcgctcgcggtc
atccgcgagatgctcgaactgaagaaggccggcaaggtcgggtccgtcgtcgtcgccggg
tgcatggccgagcggcagaaagacgtgctgctcgagcaggtgcccgaagtcgatcagatt
gtcggcgtgttcggccgcgaggagatcgctgccgtcgtggaccgtgcggtgtcgcagcgc
gacgagcagcggtcgctgttccggccggcgccggtgcgggcgctcgaggacacggcccgc
ctccgaatcaccccgcggcacttcgcgtacctgaaggtcagcgagggctgcgaccggctc
tgcacctactgcgcgattcccaagatgcgcgggaagcacgtcacgaagccgatcgaggaa
gtcattcgcgaggcccgcgagctggccgccgacggcgtccgcgaactcatcatcgtcgcg
caggacacgacctattacgggatggatctgtacggccgcacccggctcgccgaactgctg
cgcgaactcgacaaggtcgagaacatcgagtggattcgcactctgtatgcctacccggaa
cacatctcggacgagctgatcgagacgttcgcgggctcgaagaagatcatcccgtacctg
gatatgccgctccagcacatcagcgaccgcgtgctgaagcggatgatccgccgggtcgat
cgcgccgcgaccgagaagctgctgtaccggctccgcgagaagtggccggacctcgcgatc
cgcaccacgttcatcaccgggttccccggcgaaaccgacgccgagttcgaggaactgcgc
gacttcgttgcgcagttcaagttcgagcgggtgggggtgttcccgtactcgctcgaaccg
ggcacgcctgccgagaagctcgacgggcacctgcctgaggacgtgaagcaggcccgcgtg
aacgcgatcatggaagtgcaacagggcgttgcgttcggctgggccgaggcgcaagtcggc
cgggagcatcccgttgtgatcgacgggccggaccccgagttcgccaaccacttccggggc
cgcacttacgccgacgcacccgagatcgattgcgcggtgcgggtgaaggggaagaacctg
cgcccgggcgatttcgtccgggcgaagatcacggcgtccgacgggtacgacctcgtggcc
cgggcgattggccagccgtggtga
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