Gordonia otitidis: LK459_18350
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Entry
LK459_18350 CDS
T07915
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
goi
Gordonia otitidis
Pathway
goi00190
Oxidative phosphorylation
goi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LK459_18350
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK459_18350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goi03019
]
LK459_18350
Enzymes [BR:
goi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LK459_18350
Messenger RNA biogenesis [BR:
goi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LK459_18350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UEA58505
LinkDB
All DBs
Position
complement(4006193..4008391)
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AA seq
732 aa
AA seq
DB search
MSTADDTATTKVTTQPISAIPGAPPAATLEPGESADLPEDRYLNRELSWLDFNSRVLSLA
EDTSIPLLERAKFLAIFASNLDEFFMVRVAGLKRRDETGLSVRSADGLSPREQLLRIAGR
TQTLADRHARVFLDSVRPALADNGIYVVGWSDLNDAQKTRMVEYFHEDVFPVLTPLAVDP
AHPFPYISGLSLNLAVTVRDAGEGGEHFARVKVPDNVNRFVRVDQLMPPTGETDDKGHRT
AIFLPMETLIAANLGHLFPGMEIVEHHAFRITRNADFEVEEDRDEDLLQALERELARRRF
GSPVRLEVADDMTEHMLELLLRELDVNPADVIQVPGLLDLSSLFEIGSLDRPQLKDRPFI
PATHPAFGERETPKSVFSTLREGDVLVHHPYDSFSTSVQRFIEQAAADPQVLAIKQTLYR
TSGDSPIVNALIDAAEAGKQVVALVEIKARFDEQANIKWARQLEQAGVHVVYGLVGLKTH
CKTCLVVRREGSSIRRYCHIGTGNYNPKTARLYEDVGLLTAAPDIGADLTDLFNTLTGYS
RKREYRNILVAPTGIRSGIIERINREIELKRDGDPNARVRLKANALVDEQVIDALYRASQ
AGVPVEIVVRGICALRPGMPGVSDNIHVRSILGQFLEHSRIFHFGAQDEYWIGSADMMHR
NLDRRIEVMVQVRDDRLTAELGDIFDSALDPRTRCWVLQPDGSWVASPAAGEEVRDHQRQ
MMRRTRQRDAGM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagccgacgacactgcgaccaccaaggtcaccacgcagccgatcagtgcgatt
cccggtgcgccgcccgcggcaactctcgaaccgggcgaatccgccgatcttcccgaggac
cggtatctcaatcgagaactgagttggctcgacttcaattcgcgtgtgctctcgctcgcc
gaggacacgtcgatcccgcttctcgagcgggccaagttccttgccatcttcgcgtcgaac
ctcgacgagttcttcatggtccgcgttgcaggactgaagcgacgcgacgagaccggactc
tcggtacggtctgccgacggtttgtctccgcgggagcaattgctgcgtatcgcgggccgc
acccagaccctcgcagatcgacacgccagggtattccttgattcagtacgtccggcgttg
gcggacaacggaatctacgtcgtcgggtggtcggatctcaacgacgcccagaagacccgg
atggtcgagtacttccacgaggacgtcttcccggtgctgacgccgctcgccgtcgacccg
gcgcacccgttcccgtacatcagcggactgagcctcaatctcgcggtcaccgtgcgtgat
gccggcgagggtggcgagcacttcgcccgggtcaaggtgcccgacaacgtgaatcgtttc
gtgcgcgtcgatcagctcatgcccccgacaggcgagaccgacgacaagggacaccgcaca
gcgatcttcctgccgatggaaaccctgatcgccgccaacctcggacacctgttccccggc
atggagatcgtcgaacaccatgcgttccgtatcacgcgcaacgcggatttcgaggtcgag
gaggatcgcgacgaggatctgttgcaggcgctcgaacgcgaactcgcgcgtcgccgtttc
gggtcaccggtgcgtctcgaggtcgccgacgacatgaccgagcacatgctcgaactgctg
ctgcgcgaactcgacgtcaatcccgctgacgtgatccaggttccggggctgctcgatctg
tcttctctgttcgagatcggttccctcgaccgccctcaactcaaagaccgaccattcatc
cccgcaacgcaccccgcattcggcgaacgcgagaccccgaaaagcgtgttctcgacgctg
cgcgagggcgatgtgctcgtgcaccatccctacgactcgttctcgacgagtgtccagcgt
ttcatcgagcaggccgccgccgacccgcaggtgctcgcgatcaagcagaccctctatcgc
acgtcgggcgactccccgatcgtcaacgccctcatcgatgccgccgaggctggcaagcag
gtcgtcgcactcgtcgagatcaaggcgaggttcgacgagcaggccaacatcaagtgggcg
cgtcagctcgagcaggcgggcgtgcacgtcgtctacggtctcgtcggactcaagacacat
tgcaagacatgcctcgtggtccgtcgtgaagggtcgtcgatcagacgctactgccacatc
gggaccggcaactacaacccgaagaccgcccggctctacgaagacgtcggattgctcact
gccgcacccgacatcggtgccgatctgacagatctgttcaacacactgaccgggtactcc
cgcaagcgtgagtaccgcaacatcctggtggcccccacgggcatccgctccggcatcatc
gagcgcatcaaccgcgagatcgagctcaagcgcgacggcgacccgaatgctcgggttcgt
ctgaaggccaacgcacttgtcgacgagcaggtgatcgacgccctctatcgcgcgtctcag
gcgggcgtgccggtcgagatcgtcgtacgagggatctgtgcgttgcgtccgggcatgccc
ggtgtcagcgacaacatccatgtccggtcgatcctcggccagttcctcgagcactcgcgc
atattccacttcggtgcgcaggacgagtactggatcggtagcgccgacatgatgcaccgc
aatctcgatcgacgcatcgaggtgatggtgcaggtgcgcgacgatcgactgaccgcagag
ctcggcgacatcttcgactcggccctcgacccacgcaccaggtgctgggtgctgcaaccg
gacggaagctgggttgcctctccggcagcgggtgaagaggtgcgcgatcaccagcgccag
atgatgcgtcgcacgcggcagcgcgatgcgggcatgtga
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