Gamma proteobacterium HdN1: HDN1F_10070
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Entry
HDN1F_10070 CDS
T01300
Symbol
fadB
Name
(GenBank) Alpha subunit of fatty acid oxidation complex
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00071
Fatty acid degradation
gpb00280
Valine, leucine and isoleucine degradation
gpb00310
Lysine degradation
gpb00362
Benzoate degradation
gpb00380
Tryptophan metabolism
gpb00410
beta-Alanine metabolism
gpb00640
Propanoate metabolism
gpb00650
Butanoate metabolism
gpb00907
Pinene, camphor and geraniol degradation
gpb00930
Caprolactam degradation
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01200
Carbon metabolism
gpb01212
Fatty acid metabolism
Module
gpb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HDN1F_10070 (fadB)
00650 Butanoate metabolism
HDN1F_10070 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HDN1F_10070 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HDN1F_10070 (fadB)
00310 Lysine degradation
HDN1F_10070 (fadB)
00380 Tryptophan metabolism
HDN1F_10070 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HDN1F_10070 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HDN1F_10070 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HDN1F_10070 (fadB)
00930 Caprolactam degradation
HDN1F_10070 (fadB)
Enzymes [BR:
gpb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HDN1F_10070 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HDN1F_10070 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HDN1F_10070 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HDN1F_10070 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Chalcone
DUF4078
Motif
Other DBs
NCBI-ProteinID:
CBL44590
UniProt:
E1VIE8
LinkDB
All DBs
Position
1259371..1261518
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAVSVKALEDGIVELCFDLQGESVNKFNRLTLDDLGAAAEKLGADKSIKGMIVTS
AKDVFIVGADITEFTDLFKAPEAELAGWALRANKVFCAIEDLPFPTVTAINGIALGGGLE
MCLSTDYRVMSTKAQVGLPEVKLGIFPGFGGTVRMSRIIGVDNAVEWIAAGGQHKPEKAI
KDGVVDAVVAPELLKDAAVALVKQCIDGKLDYKARRQEKLDPLKLPPMENMMAFQTCTAA
VMGQAGRNYPAPVAAVQVMQQHAAMKRDQALEVEAKGFAKVAKTSVATAMVGLFLNDQAV
KKISGKWEKQSKPVKQAAVLGAGIMGGGIAFQSASKGTPIIMKDIRDEALDLGMAEATKL
LARRVEKKKMKPADMGKTLSAIRPTLNFGDFGNVDIVVEAVVENEKIKQSVLAETEALVK
EDTILASNTSTISITRLATALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDAAVAATVA
YAKKMGKTPIVVNDCPGFLVNRVLFPYFGGFGMLLRDGADFQKVDKVMEKFGWPMGPAYL
MDVVGIDTGVHAAKVMAEGFPERMQYDYKDASEVMYENKRYGQKNGVGFYKYSKDAKGKP
KKEADPATYELIKPVVSASRDFEDQEIIDRLMIPMCLEIVRCVEEGIVSTVAEADMALIM
GIGFPPFRGGALRYIDAIGVQKFVEACDKYKALGALYQPTEKLREKAAKGESFYG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgaaggaaaagctgtctcggtcaaagcactggaagatggcatcgtagagctt
tgttttgatttgcaaggcgaatctgtcaataaattcaaccgattgactttggatgatcta
ggtgctgcggccgaaaagctcggtgcagataagtccatcaaaggtatgattgttaccagc
gccaaagacgtattcatcgtaggtgctgatatcactgagttcaccgatttgttcaaagcg
ccagaagccgagttggcagggtgggcgttaagagcgaacaaggttttttgcgcgattgaa
gatcttccattccccactgttacagcgatcaatggcatcgctcttggtggcggtttggaa
atgtgcctttctaccgactatcgggttatgtcaaccaaagctcaggtgggcctgcccgaa
gtgaagttgggaatcttcccaggctttggcggaactgtgcgcatgtctcgcattattggc
gttgataacgctgtcgagtggattgctgccggcggccaacataagcctgaaaaagcgatt
aaggatggcgttgtagatgcggttgttgcgcctgaattgctgaaagatgcggccgttgcg
ctcgtgaagcagtgcatcgacggcaagcttgattacaaagcgcgccgccaagaaaagctt
gatccgctcaagctgccacctatggaaaacatgatggcattccagacctgcaccgctgcc
gtgatggggcaagctggccgcaactaccctgcgcctgtcgctgctgtgcaagtaatgcag
caacacgcagccatgaagcgcgatcaagcgctggaagttgaagccaaaggttttgcaaaa
gttgccaaaacttctgttgcaacggcgatggttggcttattcctgaacgatcaggcagtc
aaaaaaatctctggcaagtgggaaaagcaatcgaagcctgtgaagcaagctgctgtactt
ggcgcgggaattatgggtggcggtattgccttccagtcggcaagcaaaggcacgccgatc
atcatgaaagatattcgtgatgaagcgcttgatcttggtatggctgaggctacaaaactt
ctcgcgcgacgcgttgagaagaaaaagatgaagcccgccgatatgggtaagacgctttcc
gcaattcgcccaacgctgaactttggtgatttcggtaacgtagatatcgttgttgaagcg
gtagtcgaaaacgaaaaaatcaaacagtcggtactcgccgagactgaagcgctagtcaaa
gaagacacaatcctcgcgtcgaacacgtccacaatttccatcactcgcctcgcaaccgcg
ctgaagcggccggaaaatttcgtgggcatgcacttctttaacccagttcacatgatgccg
ctggtagaagtgattcgaggtgaaaagtcgtctgatgcagcggtggctgcaacggttgct
tacgcgaagaaaatgggcaaaacaccgatcgttgttaacgattgcccaggattcttggtg
aaccgcgtgcttttcccctattttggcggctttgggatgctgctgcgcgatggtgcagac
ttccagaaagttgacaaagtcatggagaaattcggctggccgatgggccctgcgtatctg
atggacgtggttgggatcgacaccggtgtacacgctgcaaaagtgatggccgaaggcttc
ccagaacgcatgcagtacgactacaaagatgcgtctgaggtgatgtacgagaacaagcgt
tacggccagaagaacggcgtaggcttctacaagtactccaaggatgcaaagggcaagccg
aaaaaagaagcggatccagcgacctatgagctcatcaagccagtggtttctgcctcgcgc
gactttgaagatcaagagatcattgaccgattgatgatcccgatgtgcctagagattgtc
cgttgcgtggaagaaggcatcgtaagcactgtggctgaggcagatatggccttgatcatg
ggcattggtttcccaccattccgtggcggtgccttgcgttatatcgacgctattggcgtg
cagaaattcgtggaagcttgcgacaagtacaaagcacttggcgcgctgtaccaacccacc
gaaaaattgcgcgaaaaagccgctaaaggcgagtccttttacggttaa
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