Gamma proteobacterium HdN1: HDN1F_10690
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Entry
HDN1F_10690 CDS
T01300
Name
(GenBank) Putative biotin carboxylase protein
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00907
Pinene, camphor and geraniol degradation
gpb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HDN1F_10690
Enzymes [BR:
gpb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
HDN1F_10690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
HlyD_D23
ATP-grasp_3
ATP-grasp_4
Colicin-DNase
DUF2118
Motif
Other DBs
NCBI-ProteinID:
CBL44652
UniProt:
E1VIL0
LinkDB
All DBs
Position
complement(1335249..1337273)
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AA seq
674 aa
AA seq
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MNTTRKASFTKILIANRGEIACRVIKTAHRLGYSTVAVYSEADAQARHVELADEAVCIGP
APVSESYLNIDAIIAAAKATGANAVHPGYGFLSENATFAARCDAEDICFIGPPIGAIELM
GSKRESKIAMLAANVPCIPGYEGDHQDESFLLKEAQRICLPLMIKASAGGGGRGMRRVDR
TEDIQESLQRARSEAENAFGSGELILERAVDSARHVEIQVFGDTHGNYVFLGERDCSMQR
RHQKVVEEAPSPAVTPEIRRAMGAAAVKAAQACKYVGAGTVEFLLDQKGEFYFLEMNTRL
QVEHPVTEMITGEDLVEWQIRVARGERLPKLQEEITLTGHAIEVRLYAEDPANQFLPQTG
DVLVWQPAPEDLARSDHGLKAGVPISRFYDPMLAKIICHGDTREDALRKLERALRQTVLM
GVTHNKGFLLDLLATQTFRDGEATTNFIALHYGNEGWHRTDHLEESLTVAALALNEQPFP
HAGSTGNLARFPQRTVLLQSGETDYSITSTLTGESNNTGERNNTRVSITTKEATTKEQTT
KQFSAQLLRLDNDKLHYRWEGVNKSARIKLVDDQIHVDLGHGPRVFENHTHRPPQSQDGA
GSGILKAPMDGAVTAVMVTVGETVSKGQTLLVIEAMKMEHLVRADLDGVVEEIIVQKGQQ
VKGKQRLGNLKANP
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaacactacccgcaaagcatccttcaccaaaatactgatcgccaaccggggcgaaatc
gcctgccgcgtgattaaaaccgcacatcgcctcggctactccaccgtcgccgtctacagc
gaagccgatgcccaagcccgccacgtagaactggccgacgaagccgtctgcatcggcccc
gcgccggtatccgaaagctacctgaacatcgacgccattatcgccgcagccaaagccacc
ggcgccaacgccgttcaccccggctacggattcttgagcgaaaacgccaccttcgccgcc
cgttgcgacgccgaagacatctgctttatcggccccccgatcggcgccattgaactgatg
ggctccaaacgcgaatccaaaatcgccatgctggccgccaacgtcccctgcattcccggc
tacgaaggcgaccaccaagacgaatccttcctcctcaaagaagcccaacgcatctgccta
cccctgatgatcaaagcctctgccggtggaggcggccgcggcatgcgccgtgtagaccgc
accgaagacatccaggaatccctgcaacgcgcccgttcagaggccgaaaacgccttcggc
agcggcgaactcatcctcgaacgcgccgtcgattccgcccgtcacgttgaaatacaggta
ttcggcgacacccacggcaactacgtctttctcggcgaacgcgattgctccatgcaacgc
cgccaccagaaagtcgtcgaagaagcgccctcgcccgcggtaacgccggaaatccgccgc
gcaatgggtgcagcagccgtaaaagccgcccaagcctgcaaatacgtcggcgctggcacc
gtagaatttctgctcgatcaaaaaggcgaattttactttctggaaatgaacacccgcctg
caagtagaacaccccgtaacagagatgatcaccggcgaagatttggtcgagtggcaaatc
cgcgtcgcgcgcggcgaacgcctgcccaaactgcaagaggaaatcaccctcaccggccac
gccatcgaagtacgcctctacgcagaagaccccgccaaccagtttctcccgcaaaccggc
gatgtactcgtctggcaacccgcccccgaagacctcgcccgcagcgaccacggcctcaaa
gccggcgttccgatcagtcgcttctacgacccaatgctggccaaaatcatctgccacggc
gacacccgcgaagacgcactccgcaaactcgaacgcgccctgcgtcaaaccgtactgatg
ggggttacccacaacaagggcttcctactcgacttgctcgccacacagacctttcgagat
ggcgaggccaccaccaacttcatcgccctccattacggcaacgaaggctggcaccgcacc
gaccaccttgaggaaagcctcaccgttgccgcactcgcactcaacgagcagccattccct
catgcaggctccaccggcaatctcgctaggttcccgcagcgcaccgtgctgctacaaagc
ggcgagaccgactactccataacatcaaccctcactggcgaaagcaacaatactggtgaa
cgcaacaatacccgcgtcagtatcaccaccaaagaggcgacgaccaaggagcagacgaca
aagcaattttctgcacagctactccggctggataacgacaagcttcactaccgatgggaa
ggcgtgaacaaatctgcacgcatcaagcttgttgatgaccaaatccacgtagacctcggt
cacggcccaagggtattcgaaaaccacacccaccgcccgccacaatcgcaagacggtgcc
ggctccggcatcctgaaggcgccgatggacggtgccgtcaccgctgtcatggtcaccgta
ggcgaaactgtcagcaaaggccaaaccttgctggtcattgaagccatgaaaatggagcac
ttggtacgggcagatctggatggcgttgtcgaagagatcatcgtccagaaaggccagcag
gtgaaaggcaagcagcggcttggcaacttaaaggcaaacccataa
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