Gamma proteobacterium HdN1: HDN1F_25840
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Entry
HDN1F_25840 CDS
T01300
Symbol
ispA
Name
(GenBank) Polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00900
Terpenoid backbone biosynthesis
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HDN1F_25840 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gpb01006
]
HDN1F_25840 (ispA)
Enzymes [BR:
gpb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HDN1F_25840 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HDN1F_25840 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
HDN1F_25840 (ispA)
Prenyltransferases [BR:
gpb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HDN1F_25840 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HrpA_pilin
Motif
Other DBs
NCBI-ProteinID:
CBL46167
UniProt:
E1VMX5
LinkDB
All DBs
Position
complement(3179951..3180844)
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AA seq
297 aa
AA seq
DB search
MTFDLHAYLQTAQFRVNTRLEYWFAKQNTTAAKLSEAMHYAVMNGGKRLRPVLAFAAAEA
CGTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILAGDALQ
CLAFEVLASSELPSMTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHGLETIH
RLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGDTLTLGKQQ
GADAVLDKATYPRILGLQAAQALATHLHDQALQAIQGFGDGATPLRALASYIVNRRY
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgacctccacgcctacctgcaaaccgcccagtttcgcgtaaacacccgtctg
gaatactggtttgccaagcaaaacaccacggccgcaaaactcagcgaagcgatgcactat
gcggtgatgaacggcggcaaacgcctgcggccggtactggcgttcgccgccgccgaagcc
tgcggtaccgacgcgtctctggcaaacgatgccgcctgcgctctagaaatgctgcactcg
tactcactggttcacgatgacctgccagcgatggataacgatgccctgcggcgcggcgtg
cccacctgccacattgccttcgacgaagccaccgcaatcctcgccggtgacgcgctgcaa
tgcctcgcctttgaggtgctcgccagcagcgaactcccctcgatgaccacccccatcaag
ctcgaaatgatccgtagcctcgccgtagcaagcggcacccacggcatggcgggcggccaa
gcgcttgaccttgccgcaagtggaaagctgctcgatttgcacggccttgaaaccatccac
cggctcaagaccggctgtttgatccgcgccgcagtgcgcctcggcgcgctggccgcccac
gcccccgaatcgtcgctactcgccctagaccaatacgcaagcgcattagggctcgcctat
caagtgcaggatgacatcctcgacgtaaccggcgacaccctcaccctcggcaaacaacaa
ggcgccgacgcagtactggacaaggccacctacccacgcatcctcggcctgcaagccgcc
caagcgctggccactcacctgcacgatcaagcactacaggccatccaagggtttggcgat
ggcgcaacaccgctgcgcgcccttgcatcttacattgtcaaccgacgctattga
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