Gamma proteobacterium HdN1: HDN1F_28090
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Entry
HDN1F_28090 CDS
T01300
Symbol
cobQ
Name
(GenBank) Cobyric acid synthase, amidation of sidechains b, d, e and g
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00860
Porphyrin metabolism
gpb01100
Metabolic pathways
gpb01240
Biosynthesis of cofactors
Module
gpb_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HDN1F_28090 (cobQ)
Enzymes [BR:
gpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
HDN1F_28090 (cobQ)
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Motif
Pfam:
GATase_3
CbiA
AAA_26
MobB
AAA_30
AAA_lid_7
Motif
Other DBs
NCBI-ProteinID:
CBL46392
UniProt:
E1VNK0
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All DBs
Position
3456444..3457937
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AA seq
497 aa
AA seq
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MSAPLPSATIMVQGTTSIMVQGTTSDAGKTTLVAALCRIFRREGMRVVPFKPQNMALNSA
VTEDGGEIGRAQALQAQAAGLAPIIDMNPVLLKPSSDTGAQVIVHGKAVGQMVASRYHDY
KAVAMQAVLESYHRLQQQFQVIVVEGAGSPAEINLRDRDIANMGFAEAVDCPVILIADID
RGGVFAHIVGTLALLSESERARVKGFVINRFRGDLRLLQSGLDWLEAYTGKPVLGVLPYL
HGLHLDGEDGIAGLEIEKPAPKKLTVVVPVLPRIGNHTDFEPLRMHPQVDFHYVRGGAAI
PRADLIILPGSKNTIGDLHWLREQGWDVLIERHLRFGGKLIGICGGFQMLGKHLYDPHEI
EGKVAHIEGLGVLDITTTMHSEKQLRRRTGTLLLSGATCEGYEIHCGLSEGAALETPLVR
FENGEVDGARTPDNQVLATYLHGLFDHPETLDALLLWAGLDAPVALDYRAERERQIDRLA
DSVASHLDLAKLRSFLG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccctttgcctagcgcaaccattatggtgcaaggcactacttccattatggtg
caaggcaccacttcggatgcaggcaaaaccaccttggtggcagcgctttgtagaatcttt
cgacgcgaaggcatgcgtgttgttcccttcaaaccgcagaatatggcgcttaatagcgcg
gttacagaagatggtggagagatcgggcgcgcgcaagcgctacaggcgcaagcggcaggc
ctcgctccaatcattgatatgaatccggttttattaaagcccagcagcgataccggcgca
caggtgatcgtacacgggaaagctgtagggcaaatggtggcctcacgataccacgactat
aaagcggtcgcgatgcaggcagtgctagagagctaccatcgtttgcagcaacagtttcag
gtgattgtcgtcgaaggggcgggcagccctgcggaaattaacttacgcgaccgagatatt
gccaatatgggctttgcggaagcggtcgattgtccggtgatcttaatcgccgacattgat
cgtggtggtgtgttcgcccatatcgttggcacacttgcgctgctgagcgagtccgaacgc
gcccgcgtaaagggctttgtgatcaatcgttttcgtggcgatctacgcctgctccagtcc
ggtttggactggctagaagcgtacacagggaagccggtattgggcgtgttgccctatctg
catggtctgcatcttgatggagaggatgggattgcaggtctggaaatcgaaaagcccgca
ccgaaaaagcttaccgtcgtcgttccagtgcttcctcgtattggcaatcacaccgacttt
gagccattgcgaatgcacccgcaggtggattttcactatgtgcgaggtggtgcagcaatt
ccccgtgccgatctgatcattttgccgggcagtaaaaataccatcggtgacttacactgg
ctgcgtgagcaaggctgggatgtgctgattgaacggcatctgcgctttggcggcaagctg
atcggaatttgcggcggctttcaaatgctcggaaagcatctgtacgatccgcacgaaatt
gaaggcaaggttgcgcacatcgaagggctaggcgttcttgatatcaccaccaccatgcac
tccgaaaaacagcttcgccgccgcacaggaacgctacttctcagtggcgcaacctgcgaa
ggctatgaaattcactgcggcctgagtgaaggcgcggcgctggaaacgccattggttcga
ttcgaaaacggtgaagtcgatggcgcgcgcacccccgacaatcaagtattggccacctac
cttcacggcctattcgatcaccctgaaaccctcgacgccctgttgctttgggcagggctt
gacgcccccgtagcgctggattatcgggcagaacgcgaacgtcagattgaccgtctcgcc
gatagcgtggccagccatttggatcttgccaagctacgcagctttctaggttag
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