Gordonia pseudamarae: GII33_14600
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Entry
GII33_14600 CDS
T07482
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd00190
Oxidative phosphorylation
gpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GII33_14600
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GII33_14600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpd03019
]
GII33_14600
Enzymes [BR:
gpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GII33_14600
Messenger RNA biogenesis [BR:
gpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GII33_14600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QHN28723
LinkDB
All DBs
Position
3321057..3323243
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AA seq
728 aa
AA seq
DB search
MPSQAAAAGDGPDVAIPGAPPAATLSPDELTDLPDDRYLNRELSWLDFNSRVLALAEDTS
QPLLERAKFLAIFASNLDEFFMVRVAGLKRRDETGLSVRSADGLSPREQLQRIAGRTQTI
ADRHARVFLDMVQPELAENNIHVVGWNDLSPQQRERLVQYFNEQVFPVLTPLAVDPAHPF
PYISSLSLNLAVTVRDSPEGPEHFARVKVPDNVKRFVRVDTLIPEPDSSDDGPAAAVFLP
TERLIAANLEHLFPGMEVADCHAFRVTRNADFEVDEDRDEDLLQALERELARRRFGSPVR
LEVADDMTEHMLELLLRELDVNPADVIQVPGLLDLSSLFEIYGVDRPQLKDRPFVPATHP
AFGERETPRSIFATLKEGDVLVHHPYDSFSTSVQRFIEQAAADPHVLAIKQTLYRTSGDS
PIVNALIDAAEAGKQVVALVELKARFDEQANIRWARKLEQAGVHVVYGLVGLKTHCKTCL
VVRREGSTIKRYCHIGTGNYNPKTARLYEDMGLFTAAPDVGADLTDLFNTLTGYSRKTGY
RNILVSPHGIRSGIVDRIAAEIDRSRAGDKRARIQLKANALVDEQIIDALYRASQAGVPV
DVVVRGICALRPGIPGLSENIVVRSILGQFLEHSRILHFSSVDEYWIGSADMMHRNLDRR
VEVMVQVRDAHSVVEIRDMFDSALDARTRCWVLQSDGSWLASPAAGEEVRDHQLQMIRRH
RRRPERSA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atcccctcccaggcggccgcggccggtgacggcccggatgtggcgattccgggagcgcca
ccggcggccacactcagccccgatgaactcaccgatctgcccgacgaccgctatctcaac
cgtgaattgagttggctggacttcaactccagggttctggcgctggccgaggacacctcg
cagccgctgctggagcgggccaagttcctggcgatcttcgcctcgaacctcgacgagttc
ttcatggtccgggtggccggtctcaaacgtcgagacgaaaccggactgtcggtgcggtcg
gccgacgggctgtcgccgcgcgagcagttgcagcggatcgccggccgtacccagacgatc
gccgaccggcacgcccgggtgttcctcgacatggtgcagcctgagttggcggagaacaac
attcacgtggtgggctggaacgatctgtcaccgcaacaacgcgagcggctcgtccagtac
ttcaacgagcaggtgttcccggtcctcaccccactggccgtcgacccggcccacccgttc
ccctacatcagcagcctgagcctgaatcttgctgtcacggttcgtgactctccagaagga
ccggagcacttcgcccgcgtcaaggtcccggacaatgtgaagcgcttcgtccgcgtcgac
accctcatccccgagccggacagctccgacgacggacccgccgcggcggtcttcctgccc
accgaacggctgatcgcggccaacctcgagcatctgttccctggcatggaggtcgccgac
tgccatgccttccgtgtcacccggaacgccgatttcgaggtcgacgaggaccgcgacgag
gacctgctgcaggccctcgaacgtgagctggctcgtagacgattcggctcaccggtccgc
ctggaggtggccgatgacatgaccgagcacatgctcgagctgctcctgcgcgaactcgac
gtcaaccccgccgacgtgatccaggtgcccggcctgctcgacctgtcgtcgctgttcgag
atctacggggtggatcgcccacagctcaaggaccgcccgttcgtgccggccacccacccg
gcgttcggtgaaagggaaacgccgcgcagcatcttcgccaccctcaaggagggtgatgtg
ctggtccaccacccgtacgactcgttctccaccagcgtgcagcggttcatcgagcaggcg
gcggccgacccgcacgtgctggccatcaagcagaccctgtaccgcacctccggtgattca
ccgatcgtcaacgccctcatcgacgccgccgaggccggcaaacaggttgtggcgctggtg
gagttgaaggcacgcttcgacgagcaggccaacatccgctgggcccgcaaactcgagcag
gcgggcgtacacgtggtgtacggcctcgtcggactcaaaacccactgcaagacgtgcctg
gtggtgcggcgcgagggatcgacgatcaaacggtactgccacatcggcaccggcaactac
aatcccaagaccgcgcgcctgtacgaggacatgggcctgttcaccgcagcaccggatgtg
ggcgcggacctcaccgatctgttcaacacgctcaccggatactcgcgcaagaccggctac
cgcaacatcctggtgtcgccgcacggaatccggtcgggcatcgtggaccggatcgccgcc
gagatcgaccgcagccgtgccggcgacaagcgtgcgcgaattcagctgaaggccaacgcg
ctcgtcgacgagcagatcatcgacgcgctctaccgggcctcgcaggccggggtgccggtg
gatgtggtggtgcggggtatctgcgcgttgcgaccgggcataccgggactcagcgagaac
atcgtcgtccgttccatcctcggccaattcctggaacattcgcgcatcctgcatttcagt
tcggtggacgagtactggatcggttcggccgacatgatgcaccgcaacctcgaccggcgc
gtcgaggtgatggtgcaggtgcgcgacgcgcactcggtggtcgagatccgtgacatgttc
gattcggcgctcgacgcgcgcacccgctgctgggtattgcagtccgacggcagttggctg
gcctcacccgccgcgggcgaggaggtgcgcgatcatcagctccagatgatcaggcgccac
cgccgccgtcccgagcgttccgcctga
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