Gordonia pseudamarae: GII33_18745
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Entry
GII33_18745 CDS
T07482
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd00860
Porphyrin metabolism
gpd01100
Metabolic pathways
gpd01110
Biosynthesis of secondary metabolites
gpd01120
Microbial metabolism in diverse environments
gpd01240
Biosynthesis of cofactors
Module
gpd_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
gpd_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
GII33_18745 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpd04147
]
GII33_18745 (hemB)
Enzymes [BR:
gpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
GII33_18745 (hemB)
Exosome [BR:
gpd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GII33_18745 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
OMS28_porin
Motif
Other DBs
NCBI-ProteinID:
QHN27710
LinkDB
All DBs
Position
complement(4327052..4328029)
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AA seq
325 aa
AA seq
DB search
MSPVIRPRRLRTSPAMRRLVAETTLAPRQLVLPMFVAYGIDEPRPISSMPGVVQHTPDSL
RRAAEEAVSAGVGGLMLFGVPGTAAKDARGSGADDPDGVLNRALRVLADDLGDSTVLMAD
TCLDEFTDHGHCGVLDGAGRVDNDATLDRYVAMSLAQARAGAHLLGPSGMMDGQVAAIRA
ALDAEGFTDTGILAYAAKYASAFYGPFREAVGSSLQGDRRTYQQDPGNRLEALREVRLDL
DEGADIVMVKPAMGYLDIVRDVAEISDVPVAAYQISGEYSMITAAAERGWIDRDAAILES
LTSIRRAGATIILTYWASEVAGRLG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacctgtgatccgcccgcgccgattgcgtacctcaccggcgatgcgccggctggtc
gccgagaccaccctggcgccgcgccagctggtgctgccgatgttcgtggcctacggaatc
gacgaaccccgccccatctcgtcgatgccaggggtcgtgcagcacacgcccgactcgctg
cgccgggcggccgaggaggccgtgtcggcgggtgtcggcgggctgatgctgttcggggtg
cccgggaccgccgccaaggacgcgcgcggttcgggtgccgacgacccggacggcgtgctc
aaccgggcgctgcgcgtgctcgccgacgacctcggcgacagcaccgtcctgatggccgac
acctgccttgacgagttcaccgaccacggccattgcggtgtgctcgacggcgccggccgc
gtcgacaacgacgccaccctcgaccgctacgtggcgatgtcgctggcccaggcccgcgcc
ggggcgcacctgctcggccccagcggcatgatggacggccaggtggccgccatccgcgcg
gccctggacgccgaaggtttcaccgacaccggcatcctggcctacgccgccaagtacgcc
tccgcgttctacgggccgttccgggaggccgtcggatcgtcgttgcagggcgaccgccgc
acctatcagcaggatccgggcaaccggctcgaagcgctccgcgaggtgcgcctggacctc
gacgagggcgccgacatcgtcatggtgaaaccggccatgggctatctcgacatcgtccgc
gacgtcgcggagatctccgacgtaccggtcgcggcctaccagatcagcggcgagtactcg
atgatcaccgccgccgccgaacgcggctggatcgaccgggacgcggccatcctcgaatcg
ctcacctcgatccgccgggccggggccacgatcatcctcacctactgggcatcagaggtc
gcgggccggctcggatag
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