Gemmatimonas phototrophica: GEMMAAP_13415
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Entry
GEMMAAP_13415 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00240
Pyrimidine metabolism
gph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GEMMAAP_13415
Enzymes [BR:
gph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
GEMMAAP_13415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AMW05537
UniProt:
A0A143BKD8
LinkDB
All DBs
Position
complement(3195662..3196582)
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AA seq
306 aa
AA seq
DB search
MASVSATLPHPCSTAAVHAARERGGAMVALESSVLAQGLLPPFNREAATRMMDAVAAAGA
TPVVTAVVRGVPSFGLEPDDLERFLAREGVRKVSARDLGIAVADQADGATTVAATLAMCT
LGGLEVFATGGIGGVHRDAPFDESADLVELARTPVIVTCAGAKSILDLPATLERLETLGV
PVVGYGTSELPGFFSVTTGLRLTARLDSPEAIARAWRAHRALGRTSAMLVVHPPPAEHAV
PVELVEAATVAALRAAADAGIRGAAVTPFLLADIQQRTNGRSVQANLALLENNARLAGQI
AVALQS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgtgagtgccactctgccgcacccctgtagtaccgcagccgttcacgccgcg
cgcgagcgcggtggtgccatggtcgcccttgaaagctccgtgctggcgcaggggctgctg
ccgccattcaaccgcgaggcggcgacccgcatgatggacgccgtcgccgccgctggcgcg
acgccggtcgtgaccgccgtggtgcgcggcgtcccgtcgttcggtctggaaccggacgat
ctcgagcgcttcctcgctcgcgagggggtgcgcaaagtgtcggcccgtgatctgggtatt
gccgtcgccgatcaggccgacggggccaccacggtggccgccaccttggccatgtgcacc
ttgggtggccttgaggtgtttgccaccggtggtatcggcggggtgcaccgggatgccccc
tttgacgaatcggcggatctggtcgaactggcccgtacgccggtcatcgtgacctgtgcc
ggcgccaagtccattctggatctcccggccaccttggagcgcctcgaaacgttgggcgta
ccggtggtgggatatggcaccagcgagctgcccggtttcttttccgtgacaacgggactg
cgcctcacggcgcgcctggattcgccggaggcaatcgcccgcgcctggcgtgcccaccgg
gctttggggcgcaccagcgccatgctggtggtgcaccccccgccggctgagcatgcggtg
cccgtggagctcgtggaggccgccaccgttgctgcgttgcgggccgccgccgacgccggt
attcgcggggctgcggtcaccccctttctccttgccgatattcaacagcgtaccaatggc
cggtccgtccaggccaatctggcgttgctcgaaaacaacgctcggctggccggacagatt
gccgtggcgttgcagtcgtga
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