Geomonas paludis: M1B72_03235
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Entry
M1B72_03235 CDS
T08160
Name
(GenBank) B12-binding domain-containing radical SAM protein
KO
K04034
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:
1.21.98.3
]
Organism
gpl
Geomonas paludis
Pathway
gpl00860
Porphyrin metabolism
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
M1B72_03235
Enzymes [BR:
gpl01000
]
1. Oxidoreductases
1.21 Catalysing the reaction X-H + Y-H = X-Y
1.21.98 With other, known, physiological acceptors
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
M1B72_03235
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Motif
Pfam:
B12-binding
Radical_SAM
Glyco_transf_4
Glyco_trans_4_4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UPU36737
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Position
785522..787045
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AA seq
507 aa
AA seq
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MSIKRVALVTPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHKWPEIEE
RLRAFAPDVVATTSFTASIAHALELTALAKKINPQVVTVHGNVHATFCYDDILKAEHDTV
DFVVRGEGEVTLVKLLDCLNAGGDPATVPGLSFWRDGAVVATPKAAPIQDLDSLPMAWDL
VEWPIYRYRAKNNARLAIVSSSRGCMEKCSFCSQQLFWERSWRARSAENFVAELELLRDS
YGVEVAMLSDEIPTFDRERWVRILDLMIERKVGVKLLMETRVDDILRDADIMDKYREAGV
EHIYVGVEAGDQETLDLFNKNTKVEQSKAAIDIINNADIVSETSFVLGMPDDTPESIAKT
IELAKHYNPDMAFFLAIAPWPYAELYPELEPYVATLDYRKYNLVEPVIKPKNMTLEELER
ELGRASQKFFMHKFQNLHQLSPWKQEFMLAVFDILINNSYLAGQMRAMMKQGGQMPPEVQ
ALVRSVKGMQLGQDEAQSHPHTFAPIP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaaaagagtagccctggtcacgccgccgtaccactccggtgtcgtggaatct
gcggggacctggcttaacgtcggcttcgtctacatagccggctcgctgcgcgccgccgga
tatgaagtcgactactacgatgcaatgagcctgtggcacaagtggccggagatcgaggag
cgcctgcgcgccttcgctcccgacgtggttgctaccacctccttcaccgcctccatcgcc
catgcgctggagctgaccgcactggcgaagaagatcaacccgcaggtggtcaccgtgcac
ggcaacgtccacgcgaccttctgctacgacgacatcctcaaggcggagcacgacaccgtc
gacttcgtcgtgcgcggcgagggtgaagtgaccctggtcaagctcctggattgcctgaac
gccggcggcgaccccgccaccgtgcccgggctttccttctggcgcgacggcgccgtggtc
gccaccccgaaggcggcgcccatccaggacctcgactcgctccccatggcgtgggacctg
gtcgagtggcccatctaccgctaccgcgccaagaacaacgcccggcttgccatcgtctcc
tcgtcgcgcggctgcatggagaagtgctcgttctgctcgcagcagctcttctgggagcgc
tcctggcgtgcgagaagcgcagagaacttcgtggcggagctggagcttctgcgcgacagc
tacggcgtcgaagtcgccatgctctccgacgagatccccaccttcgaccgcgagcgctgg
gtgcgcatcctcgacctgatgatcgagcgcaaggtgggggtgaagctcctcatggaaacg
cgcgtggacgacatcctgcgcgacgcggacatcatggacaagtatcgcgaggcgggcgtg
gagcacatctacgtgggcgtcgaggcgggggaccaggagaccctggacctcttcaacaag
aacaccaaggtcgagcagtccaaggcagccatcgacatcatcaacaacgcggacatcgtc
tcggagacctcgttcgtgctgggcatgccggacgacaccccggagagcatcgcgaaaacc
atcgagctcgccaagcactacaacccggacatggccttcttcctggccattgcaccctgg
ccctacgccgagctctacccggagctggagccgtacgtggcgacccttgactaccgcaaa
tacaacctggtcgagccggtgatcaagcccaagaacatgacgctggaggagctggagcgc
gagctgggcagggcgagccagaagttcttcatgcacaagttccagaacctgcaccagctc
tctccctggaagcaggagttcatgctggcggtcttcgacatcctgatcaacaactcgtat
ctggccggccagatgcgggccatgatgaagcagggcggacagatgccgcccgaggtgcag
gcgctggtcaggagcgtgaagggaatgcagctcgggcaggatgaagcgcagtcgcacccc
cataccttcgccccgattccctga
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