Geomonas paludis: M1B72_18595
Help
Entry
M1B72_18595 CDS
T08160
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gpl03009
]
M1B72_18595 (rimO)
Enzymes [BR:
gpl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M1B72_18595 (rimO)
Ribosome biogenesis [BR:
gpl03009
]
Prokaryotic type
ribosomal protein modification factors
M1B72_18595 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
NAGidase
Motif
Other DBs
NCBI-ProteinID:
UPU35430
LinkDB
All DBs
Position
4352845..4354191
Genome browser
AA seq
448 aa
AA seq
DB search
MNQKIKEKVSLVSLGCPKNLVDAEVMLGYLSKDEYEVTTDEMQADIIVVNTCSFIKEAKQ
ESIDTILDLADRKHDARCKLLIVTGCLPQRYQEELAKELPEVDIFIGTGDYPRIAEIIAE
KKGTETQLCYTGDPNFVYNDELPRLQSSPHYTAYLKIAEGCSNNCSYCVIPSLRGAHRSR
PFATLMAEAKALVESGVKELNLIAQDITAYGRDLPEQPSLELLVQELAKLEGLKWIRLLY
AYPDGVRDSLIELIKNEPKVCKYLDLPIQHISDPVLKNMKRRSGEADIRALIAKLRKEIP
DIAIRTSLIVGFPGETNEDFKTLLQFVEETRFDRLGVFCYSREEGTPAAEMPDQVSERVK
RERHKKLMRTQARVSFKHNRTLVDSEEDVLVEGYSEETELLLKGRSSRQAPDVDGQVYIT
AGNANVGDIVRLKITDSSDYDLIGEIID
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccagaagattaaggaaaaagtaagcctggtgagcctgggctgcccgaagaacctg
gtggatgccgaggtgatgctgggctacctctccaaggacgagtacgaagtcaccaccgac
gagatgcaggccgatatcatcgtggtgaacacctgctccttcatcaaggaggccaagcag
gagagcatcgacaccatcctcgacctggccgacaggaagcacgacgcgcgctgcaagctc
ctgatcgtgaccggctgcctgccgcagcgctaccaggaggagctcgccaaggaactcccc
gaggtggacattttcatcggcaccggcgactacccgcgcatcgcggagatcatcgccgag
aagaaggggaccgagacccagctctgctacaccggcgaccccaacttcgtctacaacgac
gagttgccgcgcctgcagtcctcgccgcactacacggcctacctgaagatcgcggaaggg
tgctccaacaactgctcctactgcgtcatcccgtccctgcgcggcgcgcaccgctcgcgc
cccttcgcgacgctcatggcggaagcgaaggcgctggtagagtcgggggtgaaggaactg
aacctgatcgcccaggacatcaccgcctacggccgcgacctgccggaacagccgagcctc
gagctcctggtccaggaactggccaagctggaaggcctcaagtggatcaggcttctctac
gcctacccggacggggtcagggactcgctcatcgagctgatcaagaacgaacccaaggtg
tgcaagtacctggacctccccattcagcacatctcggacccggtgctgaagaacatgaag
cgcagaagcggcgaggccgacatccgcgccctgatcgccaagctgcgtaaggagatcccg
gacatcgccatccgcacctcgctcatcgtcggcttccccggcgagaccaacgaggacttc
aagacgctcctgcagttcgtcgaggagacccgcttcgaccgcctcggcgtgttctgctac
tcccgcgaggaagggaccccggcggccgagatgccggaccaggtctccgagcgggtcaag
cgcgagcgccacaagaagctgatgcgtacccaggcccgggtctccttcaagcacaaccgc
accctggtcgacagcgaggaggacgtgctggtcgaggggtacagtgaggaaacggagctg
ctcttgaaggggcgttcctcccgtcaggcacccgatgtggacggccaagtgtacatcacc
gccggcaacgccaacgtcggtgacatagtgagattgaagatcactgactcctctgattac
gacctgattggggagatcatcgactag
DBGET
integrated database retrieval system
