Gibbsiella quercinecans: AWC35_06460
Help
Entry
AWC35_06460 CDS
T05060
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
gqu
Gibbsiella quercinecans
Pathway
gqu00730
Thiamine metabolism
gqu01100
Metabolic pathways
gqu01240
Biosynthesis of cofactors
gqu04122
Sulfur relay system
Module
gqu_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AWC35_06460
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AWC35_06460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gqu03016
]
AWC35_06460
Enzymes [BR:
gqu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AWC35_06460
Transfer RNA biogenesis [BR:
gqu03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AWC35_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Diphthami_syn_2
QueC
tRNA_Me_trans
ISP1_C
Motif
Other DBs
NCBI-ProteinID:
ATA19013
UniProt:
A0A250AYF2
LinkDB
All DBs
Position
complement(1431922..1433370)
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKQYDETLAVVRHWDFIEVRAKDENQR
PAIADALTRIPGIHHILEVEDRAYTDIHHIFEQTLEAYRDQLEGKTFCVRVKRRGKQDFN
SQDVERYVGGGLNQHIDSARVKLTRPQVTVNLEIEDDKLMLVKARREGIGGYPIGTQEDV
MSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHKVRFV
AVDFEPVVGEILEKVDDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIINIARAIGTEDFAKTMPEYCGVISKSPTVKAVKEKI
EEEEGKFDFTILDRVVREAKNIDIRTIASEVQEQVTEVETVAAFAASDVVLDIRAIDEQD
EKPLQLAQVEVKSLPFYKIGSQFGDLDQSKTYLLYCERGVMSRLQALYLLEQGYTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccataaaaagtcaatctgtgcgttta
cgcttcattaagatcctgacgaccaacattcgtaacgtcctgaagcagtatgatgaaacg
ctggcggtggtgcggcattgggatttcattgaggtgcgcgccaaagacgaaaaccagcgc
ccggcgattgccgatgccttgacgcgtattcccggtatccaccatattctggaggtggaa
gaccgtgcctataccgatattcaccatatcttcgaacaaacgttggaagcctaccgcgat
cagttggaagggaagaccttctgcgtgcgcgttaagcgccgcggcaagcaagactttaat
tcccaggatgtggagcgctacgtcggcggcggtttaaaccagcatatcgacagtgcgcgg
gtcaaactgacgcgcccacaggtgacggttaatctggagatcgaagacgataagttgatg
ctggtgaaagcgcgccgtgaagggatcggcggttacccgatcggtacgcaggaagatgtc
atgtcgttgatttccggcggctttgattccggggtttccagctacatgctgatgcgccgt
ggctgccgtgtgcactattgcttcttcaacctcggcggctcggcgcatgaaatcggcgtt
aagcaagtggcgcactacctgtggaatcgctttggcagctcgcacaaagtgcgttttgtg
gcggttgattttgaaccggtggtgggagagatcctggaaaaagtcgatgacggccagatg
ggtgtggtgctgaaacgcatgatggtgcgtgccgcttcccaggtggcggagcgctacggc
gtgcaggcgctggtcaccggcgaggcgctgggccaggtatccagccaaacgctcaccaat
ctgcgtttgatcgacaatgtgtcagacacgctgattctgcgcccgctgatctcccatgat
aaagagcacatcatcaatatcgcacgggcgatcggcactgaagacttcgccaaaaccatg
ccggaatactgcggtgtgatttccaaaagtccaacggtgaaagcggttaaagaaaagatc
gaagaagaagagggcaagttcgacttcacgatcctcgatcgcgtggtgcgcgaggcgaaa
aacatcgatatccgcactatcgccagcgaagttcaggaacaggtgacggaagtcgagacc
gtggcggcgttcgctgccagcgatgtggttctggatatccgcgcgattgacgagcaggat
gaaaagccgttgcaattggcgcaggttgaagtgaaatcgctgccgttctataaaattggc
agccagttcggcgatctggaccagagcaaaacctatttgctgtactgcgagcgcggcgtg
atgagccgcctgcaggcgctgtacctgctggagcaaggctacaccaacgttaaagtgtat
cgcccttaa
DBGET
integrated database retrieval system
