Gossypium raimondii: 105764549
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Entry
105764549 CDS
T04129
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105764549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105764549
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105764549
03036 Chromosome and associated proteins [BR:
gra03036
]
105764549
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105764549
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105764549
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105764549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
SCD
Adaptin_N
CLASP_N
RTP1_C1
Cnd1
Motif
Other DBs
NCBI-GeneID:
105764549
NCBI-ProteinID:
XP_012438627
UniProt:
A0A0D2T2P1
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All DBs
Position
12:46943663..46950411
Genome browser
AA seq
587 aa
AA seq
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MSTVEEPLYPIALLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHARVLLAPLETLCTVEETCVRDKAVKSLCRIGSQMKEN
DLVDWFVPLVKRLAAGEWFTARVSACGLFHIAYPSAPEMLKTELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVENAHLKAEIMQIFNNLTQDDQDSVRLLAVEGFAALGKLLEPQDCVA
HIIPVIVNFSQDKSWRVRYMVANQLYELCEAVGPQPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFSQILSPELANHHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PISLSLLKDEFPDVRLNIISKLDQVNQVVGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGTLCMQWLQDKVYSIRDAAANNLIRLAEEFGRDWAMEHIIPQV
LEMANSPHYLYRMTILRSISILAPVMGSEIACSKLLPVVVNASKDRVANIKFNVAKVLQS
LVPIVDKSVAEKTIYPCLVELSEDSDVDVRYFANQGLQSINHATMSC
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggtggaagaaccgttgtatccaatagctctcctgatagatgagctaaaaaat
gatgacatccagcttcgtttaaactcaatccgtaggctttcaaccattgctcgtgctctt
ggggaagagcgaaccaggaaggaattaattccatttctgagtgaaaacaatgacgatgat
gatgaggtgcttcttgcaatggctgaggagctgggagtgtttattccctatgttgggggt
gttgaacatgcccgtgttttgctcgcccctttggaaaccctttgcactgttgaggaaacc
tgtgtaagggacaaagctgtcaagtcattatgcagaattggatctcagatgaaggagaat
gacttggttgactggtttgttcctctagttaagaggctggctgctggtgagtggtttaca
gctcgagtttcagcctgtgggctgtttcatattgcttatccaagtgcccctgagatgttg
aaaacagaattacggtcaatatacagccaattgtgtcaagatgacatgccaatggtaaga
aggtctgccgcatcaaatctggggaaatttgctgcaacagttgaaaatgctcatttgaag
gctgagatcatgcagatatttaataatcttacacaagatgatcaagattcagttcggtta
ttggctgttgagggatttgccgctcttggaaagttgttagaaccccaggattgtgttgct
cacattatccctgtaattgtcaatttctcccaggataaatcttggcgtgtgcgttatatg
gttgcaaatcagttatatgaactttgtgaagctgtaggaccacagcctactaggacggac
ttggtgcctgcatatgtgcgcttgcttcgcgataatgaagctgaagttcgcattgcagct
gcaggaaaagtaactaaattttctcaaattttgagtccagaacttgcaaaccatcacatt
cttccttgtgttaaggagctgtcatcggattcttcgcaacatgtccgctccgctttagct
tcagttattatgggaatggctcctgtccttggaaaggatgcaactatcgagcagcttctt
ccaatatctctctctcttttgaaggatgaattccctgatgtgcgtcttaacataatcagc
aagcttgatcaagtgaatcaggttgttggaattgatcttttgtcccaatccttattacca
gccattgttgagcttgctgaggatagacattggagggttcggcttgctataattgagtat
ataccattattggctagtcagttaggtgttggattttttgatgataaacttggcaccctt
tgcatgcaatggttgcaggataaggtttactctattcgagatgcagccgctaataatttg
atacgtcttgctgaagaatttggccgagattgggcaatggagcacattattccgcaggta
ctagagatggcaaactctccacactatctgtaccggatgaccattcttcgttccatttct
atacttgctcctgttatgggatcagaaatagcatgttctaaactgctgccagttgttgta
aatgcatcaaaagacagagtcgccaatattaagtttaatgtggcaaaagttttgcagtct
ctcgttcctatcgtggataagtctgtggcggagaagacaatctatccatgcttggttgag
ctgagcgaggactcagatgtggatgttcgttattttgctaaccaaggacttcagtcgatc
aatcatgctacgatgtcctgttag
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