Gossypium raimondii: 105767722
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Entry
105767722 CDS
T04129
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
gra
Gossypium raimondii
Pathway
gra00052
Galactose metabolism
gra00511
Other glycan degradation
gra00531
Glycosaminoglycan degradation
gra00600
Sphingolipid metabolism
gra00604
Glycosphingolipid biosynthesis - ganglio series
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
105767722
09103 Lipid metabolism
00600 Sphingolipid metabolism
105767722
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105767722
00604 Glycosphingolipid biosynthesis - ganglio series
105767722
00511 Other glycan degradation
105767722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105767722
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
105767722
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105767722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
105767722
NCBI-ProteinID:
XP_012442744
UniProt:
A0A0D2TPX2
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Position
5:10797890..10806545
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AA seq
733 aa
AA seq
DB search
MNRSKSLAATSKSITAMARKQSSKTMLIFFLLLSLLAFLSFLPVFASLPSLPSYSHSYDL
HFHLPRHQRLHRRQKIGVRKFEIAEDKFWKDGKPFQIIGGDLHYFRVLPEYWEDRLLRAK
ALGLNTIQTYIPWNLHEPEAGKLVFEGIADLVSFLKLCQKLGLLVMLRAGPYICAEWDLG
GFPAWLLSIHPDVRLRSSDPAYLQKVEGWWGVLLPKVAPLLYGNGGPIIMVQIENEFGSY
GNDKAYLSHLVKLARGHLGEDIILYTTDGGSRETLEKGTIQGDGVFAAVDFTTGDNPWPI
FKLQKQFNSPGKSPPLSSEFYTGWLTHWSEKMARTDADFTAAALEKIMLQNGSVVLYMAH
GGTNFGFYNGANTGADESDYKPDLTSYDYDAPITESGDVDNAKFKAIRRVVGKFSSVSLP
SLPPNNKKTGYGSIQLKRTAFLFDLLDEIDPLHIVEAESPTAMEYLNQMFGFVLYVSEYA
AKTGGSKLVIPKVHDRAQVFISCSPEVNGGQVSYVGTIERWSNQAINLPNVKCVSSTSLF
ILVENMGRVNYGPYIFDRKGILSSVYVDGSVLKRWKMISIPFHNLNEVPKFNPVIQVTSK
FHKKLEHNSVGVEGPSFYTGHFSIDTKTEVTDTYISLRGWGKGIAFVNEFNIGRYWPTSG
PQCNLYIPAPVLRQGENVLVIFELESSNPELMVESVDQPDFTCGPGQASVHQNEDGKASA
SLLTSNPLGLRTF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaagtaaaagcctagctgcgacctccaaatcaattacagcaatggcgaggaag
caaagcagcaaaactatgttgatattcttccttttgctttcccttttagctttcctttct
ttccttcccgtcttcgcttctctcccttctcttccctcttactctcactcttacgatctt
cactttcatcttcctcgtcatcagcgtctgcatcgccgccaaaagattggtgttagaaaa
tttgaaattgcggaggataagttttggaaagatgggaagccttttcagataattggtggt
gacttgcattatttccgggttcttcctgagtactgggaagataggcttttgagggcaaaa
gcattggggttgaataccattcaaacatatattccttggaatttgcatgaaccagaggct
ggcaaacttgtttttgaaggcattgcagatttggtatcatttctcaaactttgccagaaa
ctaggtctccttgttatgcttcgagctgggccttatatttgtgcagagtgggatcttgga
ggtttcccagcttggttactttccatacatccagatgtcagattaaggtcatcagatcct
gcttaccttcaaaaggttgaaggatggtggggagtccttcttccaaaagtagctcctctt
ctttatggaaatggaggccctatcataatggttcagattgaaaatgaatttgggtcatat
ggaaatgataaagcttatcttagtcacttggtgaagttagctagagggcatcttggagaa
gacattattttgtacactactgatggaggctctcgagaaactcttgaaaaagggaccatt
cagggagatggtgtatttgcagctgttgacttcactactggtgataacccttggcccata
ttcaagttacaaaagcagttcaattcccctgggaaatcaccaccgctttcttcggaattt
tacacaggttggcttacacattggagtgagaagatggcaaggacagatgcagatttcact
gcggctgccttggaaaaaattatgttacaaaatggttctgttgtgctttatatggcacat
ggtggaacgaactttggattttataatggagcaaatactggtgcggatgagtcagattac
aagcctgatctaacatcctatgattacgacgcaccaattacagagtctggtgatgtagac
aatgcaaaattcaaagccattaggagagtggtggggaaatttagttcagtatctctacct
tcacttcctcccaataataaaaagactggatatggatccatccagttaaaaagaacagca
tttttatttgatttacttgatgagattgatcctcttcacattgttgaggctgagtcacca
actgcaatggagtatttaaaccagatgtttggatttgtattatatgtatctgaatatgca
gccaaaactggtggaagtaagctagttataccaaaggtgcatgacagagctcaagtgttc
atatcgtgctctcctgaagttaatggtgggcaagtatcatatgttggtacaattgaaaga
tggtcaaatcaagcaattaaccttcctaatgttaaatgtgtttctagcaccagcttattt
attttggttgaaaacatgggtcgtgtaaattatgggccatacatctttgataggaagggt
attttgtcttctgtttatgtggacgggagtgtactgaaaagatggaaaatgatctcaatt
ccttttcataacctgaatgaggtgccaaaatttaatcccgtcattcaggttacatccaaa
ttccataaaaaactagaacacaattcagttggtgttgaaggaccatcattctacactggc
catttctcaattgatacgaagactgaagttactgatacatacatttcacttagaggctgg
ggaaaaggaattgcttttgttaatgaattcaacattggaagatattggccgacttcagga
cctcaatgcaacctttatatccctgctccagtccttcggcagggggaaaatgttttggtg
atattcgagttagaatcatcaaaccctgagctcatggtagaatcggttgatcagccagat
ttcacttgtggtccaggacaagcaagtgtgcatcaaaatgaagatggcaaagctagtgcg
tcactgttgacatccaatccactagggctgcgtactttttga
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