Gossypium raimondii: 105768457
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Entry
105768457 CDS
T04129
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gra
Gossypium raimondii
Pathway
gra00900
Terpenoid backbone biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105768457
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105768457
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
105768457
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
105768457
2.5.1.29 geranylgeranyl diphosphate synthase
105768457
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
105768457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
105768457
NCBI-ProteinID:
XP_012443828
UniProt:
A0A0D2U1H1
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Position
5:complement(55496976..55498201)
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AA seq
308 aa
AA seq
DB search
MAKAFSHINGNPMFYFPSRLNPNRPFPLLLSYNKPLKCNQSYLASINEDIEAHLKQAIPI
REPLSVLEPMHHLTFAAPRTTASALCVAACELVNGHRDRALPVASAIHLVYAASFTHECA
PRSETSRPTSKIQHVYGPGIELQIGDAMIPFGMELLAKSDNPARNDSDRILRVMVEITRA
IGSEGMIYGQYDEVESYQSDNNKSSHIEEIERVSEKYEGTLYACAGACGAIIGGGSEDEI
EKLRKYGLHIGKIEGIMNRIGSNSDKDLMEKLVEELRNLANNELRGFNEAKVKAIFNTQS
SSFDLCKQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagctttctcccacatcaatggcaacccaatgttttattttccctctagacta
aatcccaaccgtccatttcctttgcttttgtcttataacaagcctttgaaatgcaaccaa
tcttatttggcctctataaacgaagacatcgaagcgcatctaaaacaggctatccctatt
cgtgaaccgctctctgttttggagcccatgcaccatttgacgttcgccgccccacggacc
accgcttcggctttatgcgtggcagcttgtgagttggtcaacggtcaccgggatcgagct
ttgccggtagcgtccgcgattcatctcgtgtatgcggcttcgttcacccatgagtgtgct
ccacggagtgaaacctctaggcctacgtccaaaattcaacatgtgtatggtccaggcatt
gagttgcaaattggtgatgcgatgataccatttgggatggagcttttggctaaatccgat
aatccagcccgaaatgattcagatcgaattctacgtgtgatggttgagatcacgcgtgcg
attggttcggaaggaatgatttacgggcagtatgatgaagtggaatcttatcaatccgac
aataacaagtcgagccacatcgaagaaatcgagcgtgtctccgaaaaatatgaaggaaca
ttgtatgcttgtgcgggtgcttgtggggcaataataggagggggaagtgaagatgaaata
gagaaactgagaaagtatggtttacatatagggaaaatagaggggattatgaatagaatt
ggaagcaacagtgacaaggatttgatggaaaaattggtggaggagctgagaaatttggct
aacaatgaattgagagggttcaatgaagcaaaggtgaaagcaattttcaacacacaatct
agttcatttgatctttgtaagcaatga
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