Gossypium raimondii: 105773451
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Entry
105773451 CDS
T04129
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105773451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105773451
04147 Exosome [BR:
gra04147
]
105773451
04090 CD molecules [BR:
gra04090
]
105773451
Enzymes [BR:
gra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
105773451
Transporters [BR:
gra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
105773451
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105773451
CD molecules [BR:
gra04090
]
Proteins
105773451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_21
AAA_30
Motif
Other DBs
NCBI-GeneID:
105773451
NCBI-ProteinID:
XP_012450829
UniProt:
A0A0D2R3U4
LinkDB
All DBs
Position
6:complement(10968303..10974489)
Genome browser
AA seq
1244 aa
AA seq
DB search
MGSAEKTELEKNEFPRERERRHNICIIFRYADWVDILLMVLGTIGAIGDGMSTNWLILFV
SRIMNSLGYGSNSQQNNNNFMGEVEKCTLYFTYLGLGSMVVAFMEGYCWSKTSERQVLKI
RYKYLEAILRQEVGFFDSQEATTSEVINSISKDTSLIQEVLSEKVPLFMMNTTAFFSGLA
FSAYLSWRLALVVFPTILLLIIPGILYGKYLLYISKKASKEYGKANTIVEQALSSIKTVY
SFTAERRIVERYTAILDRAVKLGLKQGIAKGLAVGSTGISFAIWAFVAWYGSHLVMYKGE
SGGRVYTAGLCFILGGLALGVALADLKYFTEATVAAASIFSRIDRTPLIQSEDTKGIVLD
TIRGDIEFDNVNFVYPSRSDSLVLKHFNLKVEAGKTVALVGASGSGKSTAIALVQRFYDA
NDGVVKIDGVDIRTLQLKWIRGKMGLVSQEHALFGTSIKENITFGKLDATMDEVMTAAMA
ANAHNFIRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESE
TLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVNNGSIIEMGSHNDLINMKDGHYAQL
AKLQRQFSCDDHEQNPETRLPSAGRMSGGRLSTSKSSPSPSPSFFATPLPNIESPKPVSH
PPPSFRRLLSLNSPEWKHGLMGSLSAIVFGAVQPVYALTIGGMISAFFAKSHQEMQARIR
TYAFIFSLLTLLSVILNLIQHYNFAYMGERLTRRIRSRMLEKLLSFEAAWFDEEKNSTGA
LCSSLSNQASMVKTLVADRISLLVQTTSAVTIAMIIGLVVAWKLAIVMIAVQPLAIMCFY
TRKVLLSSISTNFVKAQNQSTQIAVEAVYNHRIVTSFGSLGKVLQLFDEAQEEPRKEARK
ISWLAGIGMGSAQSLTFMSWALDFWYGGTLVQKGEISAGDVFKTFFILVSTGKVIAEAGS
MTSDLAKGSTAVASVFEILDRQSSITPGSQGDGTNGIKLERMSGKIELKKVDFAYPSRPE
TLVLRQFSLEVKPGRSVGLVGKSGCGKSTVVGLIQRFYDVEMGSVRVDGIDIRGLDVQWY
RRQMALVSQEPVIFSGTIRDNIVFGKLDASENEVVEAARAANAHEFISALKEGYETECGE
RGVQLSGGQKQRIAIARAIIRNPKILLLDEATSALDVQSEQVVQEALDRIMVGRTTVVIA
HRLNTIKKVDSIAFVADGKVVEQGTYAQLKNQHGAFSKLASLQT
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgcagagaagactgagttagagaaaaatgagttcccaagggagagggaaaga
aggcataacatatgcataattttcagatatgctgattgggtcgatattctgctaatggta
ttgggtaccattggagctattggcgatggaatgtcgaccaactggttgatactctttgtg
agtcgcataatgaacagcttgggttatggtagtaattcccaacaaaataataacaatttc
atgggagaggtcgaaaagtgcaccttatactttacatacttgggactaggaagcatggtg
gtggctttcatggaagggtactgttggagcaaaaccagcgagcggcaagtgctgaagatt
cgttacaagtatttggaagcaattcttagacaagaagttgggttttttgactcacaggag
gctaccacttcagaagtcatcaacagcatatctaaagatacatctctcatacaagaagtc
cttagtgaaaaggttccattatttatgatgaatacaacagccttcttctcaggcctggca
ttttcagcatatctttcatggaggttggctctagtagttttcccaacaatactattgctg
ataattccaggaatactttatggaaagtaccttttgtatatctccaagaaagcttccaag
gagtatggaaaggcaaacaccatagtggagcaggcactaagctccattaaaacggtgtat
tccttcacagcagaaaggagaatcgtggagagatatacagcaatattggatagggcggtg
aagttgggattgaagcaagggatagccaaagggttggcagtggggagcacagggatttct
tttgcaatatgggctttcgttgcttggtatggaagtcatttggtaatgtacaaaggagaa
agtggaggaagagtttatacggctggtctctgctttatattgggtggcctggcactcgga
gtagcactggctgatctcaagtacttcacggaagccacggttgccgctgcaagcatcttc
tctaggatcgaccgtactcccctaatccagagcgaggataccaaaggcatcgtgttagac
acaatccgaggagacatagagttcgacaacgtcaatttcgtatacccttctcgctccgat
tccctcgttctcaaacatttcaacctcaaagttgaagcaggcaaaaccgtggcacttgta
ggtgccagtggaagcggcaaatccaccgccattgctttggtgcaacgtttttatgatgcc
aacgatggggtagtgaagatcgatggtgttgatataagaacactgcaattgaaatggatc
agaggtaaaatggggcttgttagtcaagaacatgccttgtttgggacttccatcaaggaa
aatataacgttcgggaagctagatgctaccatggatgaagtaatgaccgctgccatggct
gctaatgctcataattttataagacagcttcctcaaggctatgaaaccaagataggggaa
cgaggagcactgttgtcaggaggacaaaagcagcgaatcgcgattgctagagccattatc
aagaaccctgtgatactgctacttgatgaggcaacgagtgcccttgattctgaatcagaa
acactagtccaaaatgcacttgatcaggcctccatgggaagaaccaccctagttgttgcc
cacaagctctccactattcgaaatgcagacctcattgcagttgttaacaatggtagtatc
atagaaatgggatcccacaacgatctcataaacatgaaggacggccactatgcacaactt
gcaaagctgcaaagacaattcagctgcgatgaccatgaacaaaatccagaaacacgcctt
ccatctgcaggaagaatgagtggcggcaggctaagcacttccaaatcaagcccaagccca
agccccagtttcttcgctacgccgttgcctaatatcgaaagtccgaaaccagtgtctcat
ccccctccttccttccgtaggcttctctctctaaattccccagaatggaagcatggtttg
atgggtagcctctcggctatagtttttggagctgttcaacctgtttatgctttaaccatt
ggtggaatgatttcagccttttttgcaaaaagtcaccaagaaatgcaggctcgaatacgc
acttacgctttcatattttctttgctcaccttgctctctgtcattctcaatcttattcag
cattataattttgcttacatgggcgagcggttaaccaggagaatccgaagtcgaatgctg
gaaaaattattgtccttcgaagccgcttggtttgatgaagaaaaaaactctactggagct
ttatgctcgagtctgagcaatcaggcttcgatggttaagacactcgtcgcagaccgaatc
tcattgttagttcaaaccacttctgctgttaccatcgcgatgattatcgggctagtcgtg
gcttggaagttagcaatagtgatgattgcagtccaacctctcgcaattatgtgtttctac
acacgaaaagttttgctttctagcatttcaactaatttcgtcaaggcacaaaatcaaagt
actcaaatagcagtggaagctgtgtataatcatagaattgtaacctcatttgggagccta
ggtaaggttcttcaacttttcgatgaggctcaagaggaaccaaggaaagaggctaggaaa
atatcatggctagcggggattggtatggggtcagctcaaagcctaacatttatgtcatgg
gctttagatttttggtatggaggtacattggttcaaaagggagagatatcagcaggggat
gtgtttaagacattctttatcttggtgagcaccggaaaggtcatagccgaagctggaagt
atgacctccgatctagccaagggctcaactgcagtggcatcggtgtttgagatccttgat
cggcaatcctccattactccagggtctcaaggagatggcaccaatggaataaagctagaa
agaatgagtggaaagatagagctgaaaaaggttgattttgcatatccaagccggccggag
acgctagtgttgcgtcaatttagcttggaggtgaaaccaggcagaagcgttggactagtt
gggaaaagtggatgtgggaaatcaacggtggttggattaatccaaagattttatgatgtt
gaaatggggtcggtgagagtggatggtatcgacataagaggactagacgttcaatggtac
aggaggcaaatggcactggtcagccaagagccagttatattttcaggcaccatccgggac
aacattgtgttcggaaagctcgacgcatcagagaatgaagttgtggaagcagctagagca
gcaaatgctcatgaattcatctcggcactgaaggaaggatacgaaacagaatgcggagaa
agaggagtgcaattatcaggaggacagaaacaaagaatagctatagctagagctataatt
aggaacccgaaaatacttttactagacgaggcgactagcgcactcgatgtgcaatctgaa
caagttgttcaagaagcattagatcgaatcatggtgggaaggaccacagtggtgatagct
catcggcttaacacaataaaaaaggttgattcaattgcatttgtggccgatgggaaggtt
gtggagcaaggtacctatgctcagctcaagaaccagcacggagcattttccaagcttgca
agccttcaaacataa
DBGET
integrated database retrieval system
