Gossypium raimondii: 105780286
Help
Entry
105780286 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
gra
Gossypium raimondii
Pathway
gra00906
Carotenoid biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
105780286
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105780286
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
105780286
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Squalene/phytoene synthase
105780286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
105780286
NCBI-ProteinID:
XP_052485871
LinkDB
All DBs
Position
4:complement(45790605..45798680)
Genome browser
AA seq
365 aa
AA seq
DB search
MAAGGVVWVTFPKQNLIPPPRKRFGRKLRTGVPLISSTAERAYSEEKVHEVVLKQAAWVK
QQRPNEGCKDWDLLNEAYERCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDEL
VDGPNASHITPRALDTWEKRLDNIFQGRPYDLFDAALSHTVSNYPLGIQPFKDMIXGMRL
DLLKTRYNNFDELYLYCYYVAGTVGLMSVPVMGIASESKASNETVYSAALALGIANQLTN
IIRDVGEDCRRGRIYLPQDELASAGISEDEIFRGLVSNKWKIFMKNQIKRARMYFDEAEK
GVAELEEASRWPVWASLLLYRQILDVIEENDYNNFTKKAYVGKAKKFASLPLAYGRAIMG
TSKFF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtggtgttgtttgggtgacatttcccaaacagaatttgataccaccacca
aggaagagatttggtcggaaactcaggaccggcgtcccactgatctcatcgacggcggaa
agagcatattcagaagaaaaggtgcatgaggtggtgttgaagcaagccgcttgggttaaa
caacagaggccaaacgaaggatgcaaagattgggatctgttgaatgaagcttatgagagg
tgtggtgaagtctgtgcggagtatgccaagactttctacctgggtacattgcttatgaca
ccagaacgtcggagggctatttgggccatttacgtttggtgcagaaggacagatgagctg
gtagatggaccaaatgcttcacacattacaccaagggctcttgacacttgggagaaaaga
ttagataacatctttcaaggtcgtccctatgacttgtttgatgctgctttatctcatact
gtctcaaactaccctcttggtattcagcccttcaaggacatgatataagggatgaggtta
gatttattgaaaaccagatataacaactttgatgaactctatctatactgctactatgtt
gctgggacggtcggactaatgagtgttccggtaatgggaatcgcatccgaatcaaaggca
tccaacgaaaccgtgtatagtgctgcattagccctcggaatcgctaatcaacttactaat
ataatccgagatgttggggaagattgtaggagaggaagaatatatcttccacaagatgaa
cttgcctcggcagggatatcggaagacgaaatatttcgaggactagtgagcaataaatgg
aaaattttcatgaaaaatcaaataaaacgagcaagaatgtactttgatgaggccgaaaaa
ggggttgcggagctagaggaggcaagcagatggccagtgtgggcatcattgttgttgtat
agacaaatcttagatgtcattgaagaaaatgactataataatttcaccaaaaaggcttat
gtagggaaagcaaagaaatttgcttcacttccactggcttatggaagagcaattatgggc
acttccaaattcttctga
DBGET
integrated database retrieval system
