Gossypium raimondii: 105785734
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Entry
105785734 CDS
T04129
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra00600
Sphingolipid metabolism
gra01100
Metabolic pathways
Module
gra_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105785734
Enzymes [BR:
gra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
105785734
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
105785734
NCBI-ProteinID:
XP_012467332
UniProt:
A0A0D2Q8F1
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Position
1:complement(37291559..37297491)
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AA seq
543 aa
AA seq
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MDSYSSWLNSFLVRFRLSANLFLSQFEPLALLLAPLLTLFIARLLHSLLSVIHEKGLKAT
VLVLFMSSIKLVPGVQSYIDAEKQKVVDKLQSGSKSKREHWRTELPTTGLGVGVIEEMKD
VKSNDADWKGKCSGTVYIGGSESEGHFSLINEASSMFAHTNPLHLDVFQSVARFEAEVVA
MTADLLGSKEKASGGQVCGNMTSGGTESILLAVKTSRDYMKAKKGITRPEMIIAESAHSA
YDKAAQYFNIKLRRVPVNKEFKADVKAIRKQINRKTILIVGSAPGYPHGIIDPIEELGKL
ADSYGICLHVDLCLGGFVLPFARKLGYPIPPFDFTVRGVTSISADVHKYGLAPKGTSVVL
YRNHDIRKHQFVAVTEWSGGLYVSPTIAGSRPGGVIAGAWAAMMSLGQQGYLENTRKIME
VSKMIQKGIKEIPELFIIGNPDMTIVAFGSAVLDIFEVNDIMSGKGWHLNALQRPNSIHI
CVTLQHVPVVDAFLQDLREAVQTVKENPGPISGGLAPIYGAAGKMPDRGMVQDLLVNYMD
GTC
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggattcttattcttcttggttgaattctttcttagttcgcttcagactgtctgccaat
ctcttcctttcacaattcgaacctttggctctgcttctcgcccctctgctcactctcttt
atcgcccgtctacttcactcgctcctttccgttattcacgagaaaggcctcaaagctacg
gtcttagtcttgttcatgagttccatcaagttggttcctggtgttcagagttatattgat
gcagagaagcaaaaggttgtggataagctacaatctggtagcaaatccaaaagagaacac
tggaggacagagttgccaaccacaggtttaggagtgggtgttatagaggaaatgaaagat
gtaaagagcaatgatgctgattggaaaggaaaatgctccggtacagtctacattggtgga
agtgaatctgaaggacatttttctttgatcaatgaggcaagctcgatgtttgcacatacc
aacccattacatttagatgtgtttcagagtgtggcgcgatttgaggctgaagtggttgct
atgacagcagatctacttggcagtaaagagaaggcttctggaggacaagtttgtggaaac
atgacatcaggaggaactgagagcatattattagcagtgaaaacatctcgggattacatg
aaggcgaagaagggaattacaaggccagaaatgataatagctgaatctgcacattcagca
tatgacaaggcagcacaatattttaacatcaaactccgtcgcgtccctgtcaataaagaa
tttaaagcagatgttaaagcaatcagaaaacaaattaacagaaagacaatcttgattgtt
ggatctgcacctgggtatcctcatggcatcattgaccctattgaggagcttggtaaactg
gctgatagctatggaatttgtctccatgttgacctttgtcttggtggctttgtgttgcct
tttgctcgtaaactcgggtacccaattccgccatttgatttcactgttaggggagtaaca
tcaatttcagcggatgtgcataaatatgggctggctcctaaaggaacgagtgtagttctt
tacagaaatcatgacattagaaagcatcaatttgtagctgttactgagtggtcgggtggg
ctttatgtgtctccaaccatagctggaagcaggcctggaggagtaattgctggagcttgg
gcagcaatgatgtctctgggacaacaaggttacttggagaacacaagaaaaatcatggaa
gtatcgaagatgattcagaaagggataaaggagattcctgagttgttcatcattgggaac
ccagacatgacaatcgtggcatttggatctgctgttctggacatatttgaagtcaatgat
atcatgtctggcaaaggttggcatttaaatgcattgcagaggcccaacagcattcatatc
tgtgtcactcttcaacatgtaccagtagttgatgccttcctccaggatttgagggaagct
gtacaaactgtgaaagaaaacccagggccgataagcggaggtctagcacccatatacggt
gctgcagggaagatgccagatcgaggcatggttcaagatttgttggtaaattacatggat
ggtacatgctag
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