Gossypium raimondii: 105794001
Help
Entry
105794001 CDS
T04129
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
gra
Gossypium raimondii
Pathway
gra00280
Valine, leucine and isoleucine degradation
gra00650
Butanoate metabolism
gra01100
Metabolic pathways
gra04146
Peroxisome
Module
gra_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
105794001
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
105794001
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105794001
Enzymes [BR:
gra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
105794001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
105794001
NCBI-ProteinID:
XP_012478423
UniProt:
A0A0D2QQ54
LinkDB
All DBs
Position
7:complement(35679575..35690833)
Genome browser
AA seq
433 aa
AA seq
DB search
MSSLEEPLGFDKLPSMSTIDRIQRFSAGACRPTVDDMGMGNCWIEGRGCSTSNSSDEDYE
EYKGEAFPWRRHVRDASDGEAFNRRAKSLSKNRMKFGHVCKSRNLPDQHYSSKCTERGTR
GITNKFLNGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIRRLVSSGLPVVEATSFVSP
KWVPQLADAKDVMKAVCDIEDARLPVLTPNVKGFEAAVAAGAKEVAIFASASESFSKSNI
NCSIEESLARYRAVCLAAKEHSVPVRGYVSCVVGCPVEGTIPPSKVAYVAKELYDMGCFE
ISLGDTIGVGTPGTVIPMLEAVMAVVPAEKLAVHFHDTYGQSLPNILISLQMGISTVDSS
VAGLGGCPYAKGASGNVPTEDVVYMLNGLGVKTNVDLAKLMLAGEFISNHLGRQSGSKTA
VALCRVTADASKI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggaggaaccactcggttttgacaagcttcctagcatgagtactatagat
aggattcagaggttctcagctggtgcttgccggcccacagtagatgatatgggcatggga
aactgctggatcgaagggaggggttgcagcacatccaatagctccgatgaggattatgaa
gaatataaaggggaggcattcccatggagaagacatgtgagggatgcatctgatggtgaa
gccttcaaccgaagggctaaaagcttaagcaagaataggatgaaatttggacatgtttgt
aaatcaaggaacttgccagatcagcactatagctccaagtgcactgaaagaggcacaagg
ggcataacaaataagtttttaaatggtattccaaagtttgtgaagatagtagaagttggt
ccaagggatggattacagaatgaaaagaatattgtacctacatctgtgaaagttgaattg
attcggagattggtgtcttcagggttgcctgttgttgaagctacaagttttgtatctcct
aaatgggttcctcagctagcagatgcaaaagatgtaatgaaagcagtttgcgacatagag
gatgccagactgcctgttctaactcctaatgtgaagggctttgaagctgctgttgcagca
ggtgcaaaagaagtagcaatctttgcatctgcttccgagtccttttcaaagtcaaacatt
aattgcagcattgaagaaagccttgcccgttaccgtgctgtttgtcttgctgctaaggag
cattcagttcctgtacgtgggtatgtttcatgcgtggttggatgtccagtggaaggaaca
attcctccgtcgaaagtggcctatgtggcaaaggaactttacgatatgggttgttttgaa
atatcccttggtgatacaattggagttgggacccctggtactgtgattcccatgcttgaa
gcagtaatggccgttgttcctgctgaaaagcttgctgtccacttccacgacacttatgga
caatctcttccaaatattttaatttctctccaaatggggattagcacagtggattcatca
gtggcggggttgggtggttgtccatatgcaaagggagcttcagggaatgttcccacggaa
gatgtggtgtatatgctgaacggccttggtgtgaagacgaatgtggatctggcaaagctc
atgttggcgggtgaattcatcagcaaccatctgggtcgacaatctggttccaagactgcc
gttgcgctgtgccgggtaaccgctgatgcttccaagatatga
DBGET
integrated database retrieval system
