Gossypium raimondii: 105804220
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Entry
105804220 CDS
T04129
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
gra
Gossypium raimondii
Pathway
gra02010
ABC transporters
gra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105804220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105804220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105804220
Enzymes [BR:
gra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
105804220
Transporters [BR:
gra02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
105804220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_23
SMC_N
nSTAND1
Mg_chelatase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
105804220
NCBI-ProteinID:
XP_012492181
UniProt:
A0A0D2QYC6
LinkDB
All DBs
Position
11:30758814..30776920
Genome browser
AA seq
1335 aa
AA seq
DB search
MPSLQLLQLTDRGRNLLASRRKAVLLASGIVVAGGTAAYLQSRFSSKKPYSYGHSNGVQD
DRENSDEVLKRNNNVKGTTRKRGGIKSLQVLTAILLSKMGQTGARDLLALVGIVVLRTAL
TNRLAKVQGFLFRAAFLQRVPSFFLLISENILLCFLLSTFHSTSKYITGTLSLSFRKILT
KLIHTHYFENMAYYKISHVDGWIRNPEQRIASDVPRFCSELSELVQDDLTAVTDGLLYTW
RLCSYASPKYIFWILAYVLGAGAAIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESI
AFYGGESREESHIQQKFKNLVRHLRVVLHDHWWFGMIQDFLLKYLGATVAVVLIIEPFFA
GNLRPDTSTLGRAEMLSNLRYHTSVVISLFQALGTLSISSRRLNRLSGYADRIHELMLIS
RELSAVDKKPSFQRAASRNYLTEANYVEFSNVKVVTPSGNVLVKDLSLRVESGSNLLITG
PNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLT
ADQEVEPLTHDGMVELLKNVDLEYLLNRYQPDKEVNWGDELSLGEQQRLGMARLFYHKPK
FAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLNGEGGWTVHYK
SEDSPVQSENGIELTEVSETNRQTDAIAVQRAFTAAKQDSAFSNPKTQSYVSDVIAASPS
VNHDVKLPVVPQLQRDPRVLPLRVAAMFKVLVPTLFDKQGAQLLAVALLVVSRTWVSDRI
ASLNGTTVKHVLEQDKAAFIRLIGISVLQSSASSFIAPSLRHLTARLALGWRIRLTQHLL
KNYLRNNAFYQVFHMSSKNIDADQRITHDLEKLTTDLSGLVTGMVKPFVDILWFTWRMKL
LTGQRGVTILYAYMLLGLGFLRTVTPDFGDLTSREQQLEGTFRFMHERLRTHAESIAFFG
GGAREKAMVESRFRELLDHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYALEHKGD
RALVSTQGELAHALRFLASVVSQSFLAFGDILELHKKFLELSGSINRIFELEELLEAAQS
GDLNIDKLSQSRSTSLYAEDVISFANVDIISPAQKLLAKQLTCNVVPGKSLLVTGPNGSG
KSSLFRVLRGLWPIVTGRLYKPIHYFDEEAGSSCGIFYVPQRPYTCLGTLRDQIIYPLSR
EEAEMRELKFYGKDAINILDARLKTILENVRLNYLLQREDGGWDSNLNWEDTLSLGEQQR
LGMARLFFHKPKFGILDECTNATSVDVEEQLYRVAKDLGITVITSSQRPALIPFHALELR
LVDGEGQWELRSIRQ
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcaactgttgcagttaactgatcgtggacgaaatcttttggcctctagg
aggaaagcagtactgcttgcttctggtatcgtggttgctggtggcactgctgcctatctg
caatcgcggtttagtagtaagaagccctattcttatggtcattccaatggggtgcaagat
gatagagaaaattcagatgaggttcttaaaaggaataataatgtaaagggaactacacga
aagagaggtggaataaagtcccttcaggttttaacagcaattcttctgtctaagatgggc
caaactggcgcgcgagatcttttggctttggtgggcatagtggtcctgagaaccgctttg
accaatagattagcaaaagttcaggggtttctattccgtgctgctttccttcagcgtgta
ccatcatttttcctgctaatatccgaaaacattttgctgtgttttcttctgtcaaccttt
cattctacttcgaagtacataactggtaccctaagtctgagtttcaggaaaattctgaca
aagctcatccatacacattactttgagaatatggcatattacaaaatatcacacgttgat
ggatggattaggaatcctgaacaacggattgcaagtgatgtaccaagattctgttcagag
ttgagtgagcttgtacaagatgatttgacagcagttactgatggtctgctttatacttgg
cgtctttgttcttatgctagcccaaaatacattttctggatattggcttatgttttggga
gcaggagctgcaataagaaatttctctccagcttttggaaaactaatgtccaaagaacaa
cagttggaaggagaatacagacagctccattcgaggttaaggacccatgcagaaagtatt
gcattttatggtggagaaagtagagaagaatctcacatccagcagaagtttaagaatctt
gttaggcacttgagggtcgtacttcatgaccattggtggtttggcatgattcaagacttc
ttattgaaataccttggtgccactgttgctgtcgtgttgattattgagcctttctttgct
ggaaatcttagaccggacacttcaacattgggacgggcagagatgttaagcaatctaaga
tatcataccagtgttgtaatttcactatttcaggccctaggaaccctttctataagttca
agacggctaaatcgcctcagtggttatgctgatcgcattcatgagttaatgctcatatca
agagagctaagtgctgttgataaaaaaccgtcctttcaaagagcagcaagtaggaattac
ttaactgaagctaattatgttgagttttccaatgtaaaggttgttactccatctgggaat
gttttggtgaaggatctctctctgagggttgaatcgggatctaatcttttgattacaggt
ccaaatggcagtggaaagagttcccttttccgggttttaggtggtctttggccactggta
tctggccatattgtgaaacctggggttggttctgatcttaataaggaaatattttacgtg
ccacaaagaccatatacagctgttggaacccttcgcgaccagttaatttatcctcttacg
gcagatcaggaggttgaacctcttacacacgatggaatggtagagctactgaaaaatgtt
gaccttgaatacctattaaatcgctaccaacccgataaagaggttaactggggtgatgaa
ctgtctcttggggagcaacagagattggggatggctagactgttctaccataagcctaaa
tttgcaattcttgatgagtgcactagtgctgtgacaactgatatggaggagcggttttgt
gctaaagttagagctatgggtacatcatgtataaccatatcacatcgtccagcgctagtt
gcatttcatgatgtggttttgtctttgaatggagaaggaggttggacagttcattataaa
agtgaggattctcctgtacaaagtgaaaatgggattgaattgactgaagtttctgagaca
aaccgccaaactgatgcaattgcagttcaacgagcattcacagcagctaaacaggattct
gcattctcaaatccaaagactcaatcatatgtatcagacgtcatagcagcatctccctct
gtgaatcatgatgttaagttacctgttgttcctcaactccagagggatccaagagtactt
ccattaagagttgccgccatgtttaaagtactggtacctaccttatttgacaaacaaggg
gctcaactgcttgcagttgctttacttgttgtctcgagaacttgggtatcagatcggatt
gcatcattaaatggaacgactgtgaagcatgttttggagcaggataaggcagcttttatc
cgattaattgggataagtgttcttcaaagctctgcatcttctttcattgcaccttccttg
aggcacttgactgcaaggctggcccttggatggaggatcagattgactcaacatttgctg
aagaactacttaagaaataatgcattttaccaggtctttcacatgtcaagcaaaaatatt
gatgcggatcaaagaataactcatgatcttgaaaagttaactactgatttatcggggctt
gttactggaatggtaaagccatttgttgacattttgtggttcacctggagaatgaagctt
ttaactggacaaaggggtgtcaccattttgtatgcttatatgttgcttggtctgggtttt
ctaaggactgttactcctgattttggtgatttgacaagtcgagaacaacaacttgaggga
acctttaggttcatgcatgaaagactgcgcactcatgctgagtctattgctttctttgga
ggtggtgctcgagaaaaagctatggttgagtcaagatttagggagcttcttgatcactct
ttgttacttttgaagaagaaatggttgtttggtattcttgatgattttgtaacgaaacag
cttccacataatgttacctggggtttgagcttattatatgccttggaacacaagggggac
cgagccttagtttctactcaaggtgagcttgcgcatgcgctgcggttcctggcatctgtt
gtgtctcaaagctttttagcttttggtgacatcctggaattgcataaaaagttcctggag
ctatctgggagcatcaaccggatttttgagcttgaagagcttctcgaagctgcacagtct
ggggatttaaacatcgacaagttgtcacagtctcggagcactagtctctatgcagaggat
gtcatttcttttgccaatgtggatataatttctccagcacagaaactgttggctaagcag
ttgacatgtaatgttgtaccaggaaagagcctgcttgttactggtccaaatggtagcgga
aaaagttctctcttcagagtacttcgaggtctctggcccattgtgactggaagactttat
aaacctatccactattttgatgaagaggctggatcgagttgtggcatcttctatgttcct
cagcgaccatatacatgcctgggaactttaagggatcaaatcatatatcctctctctcgt
gaggaagctgagatgagggaattaaagttttatggaaaagatgccataaacattcttgat
gctcgattgaaaactattcttgaaaatgtccggttgaattatcttttgcaaagagaggat
ggtggttgggattccaatcttaattgggaagacacactctcgcttggagaacagcaaaga
ttaggcatggcacgtttattcttccacaagcctaaatttggtatccttgacgagtgcaca
aatgccacaagtgtcgacgttgaggaacaactttacagagtggcaaaagatctgggtata
actgtcattacctcatcacagcggcctgctctaataccattccatgctttggaattaaga
ctggttgatggtgagggtcagtgggagcttcgttcaatcaggcagtga
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