Granulicella sp. 5B5: GOB94_02520
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Entry
GOB94_02520 CDS
T08433
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb00540
Lipopolysaccharide biosynthesis
grb01100
Metabolic pathways
grb01250
Biosynthesis of nucleotide sugars
Module
grb_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GOB94_02520 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
grb01005
]
GOB94_02520 (rfaD)
Enzymes [BR:
grb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GOB94_02520 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
grb01005
]
Core region
GOB94_02520 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QMV17696
UniProt:
A0A7D7X779
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Position
complement(578616..579590)
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AA seq
324 aa
AA seq
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MARPIVVTGAAGFIGRNVVAELNRRGEDEIVLVDELGKDEKWKNLVGLRYEDIVSPEEFL
GLLEDGNFADARSVIHMGACSSTTEKDADYLLRNNYQYTRVLANWCESHEVRFVYASSAA
TYGDGSDGYSDDDAVTPELRPLNMYGYSKQMFDAWALKQGLLSSIVGLKFFNVYGPHENH
KGDMASMVLKSYEQIRCDGFVRLFKSYDPQYKDGEQLRDFVWVGDAVDVVLHFAEQEYGA
PGGLFNCGTGKARTWNDLASAVFAAMGKEPKIEFIEMPEVLHGKYQYRTEAQMEKLRKAG
YKRAFTSLEDGVREYVAFLERRSA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaccgattgtagtgacgggcgcggctggatttatcggcaggaacgtggtggcg
gagctgaaccggcgcggtgaagacgagatcgtgctggtggacgagctgggtaaggacgag
aagtggaagaatcttgtcggactgcggtatgaggacattgtgagccctgaggagtttctg
ggcttgctggaagatgggaactttgcggatgcgcgcagcgtgatccatatgggtgcgtgc
agctcgacgacggagaaggatgcggactacctgctgcggaacaactaccagtacacgcgg
gtgctggcgaactggtgcgagagtcatgaggtgcggtttgtgtatgcgtcgagtgcggcg
acctatggcgatggcagcgatgggtacagcgatgacgatgcggtgacgccggagctgcgg
ccgctgaatatgtatggctactcgaagcagatgttcgacgcgtgggcgctgaagcagggg
ctgctgagctcgattgtggggctgaagttcttcaatgtgtatgggccgcatgagaaccat
aagggcgatatggcgtcgatggtgctgaagagctatgagcagattcggtgcgatggattt
gtgcggttgttcaagagttacgatccgcagtataaggacggcgaacagctacgcgacttt
gtttgggtgggcgatgcggtggatgtggtgctgcattttgcggagcaggagtatggtgct
ccgggtgggctgttcaactgcgggacagggaaggcgcggacgtggaacgacctggcgagc
gcagtgtttgcagcgatgggcaaggagccgaagattgagtttatcgagatgccggaggtg
ttgcacgggaagtatcagtaccggaccgaggcgcagatggagaagctgcggaaggctggt
tacaagcgggcgtttactagtctggaggatggtgtgcgggagtatgtggcttttctggag
cgtcgcagtgcataa
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