Gordonia rubripertincta: GCWB2_12660
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Entry
GCWB2_12660 CDS
T05629
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00270
Cysteine and methionine metabolism
gru01100
Metabolic pathways
Module
gru_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GCWB2_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gru03000
]
GCWB2_12660
03032 DNA replication proteins [BR:
gru03032
]
GCWB2_12660
03036 Chromosome and associated proteins [BR:
gru03036
]
GCWB2_12660
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gru02048
]
GCWB2_12660
Enzymes [BR:
gru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
GCWB2_12660
Transcription factors [BR:
gru03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
GCWB2_12660
DNA replication proteins [BR:
gru03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
GCWB2_12660
Chromosome and associated proteins [BR:
gru03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
GCWB2_12660
Prokaryotic defense system [BR:
gru02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
GCWB2_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ASR03329
LinkDB
All DBs
Position
2761371..2762480
Genome browser
AA seq
369 aa
AA seq
DB search
MPLHPAASLKQRKHPQIVDLFAGPGGLDVAAHWLGIPTIGIEWDDGACATRSAAGILTRQ
GDVRRFSPSDFQAATVLAAGPPCQTFTVAGTGSGRKALDDVLTFVKQMSAGEDVSSAVSQ
LADERTGLVLEPLRWLLEANTVSRPYDAVILEQVPAVLPVWEAYEEALQSMGVGYKTCSG
VLKTEAFGVPQTRRRAVLIASRYFQPELPAETHERFRLRHSARLNTLTNGRRPCVSIQDA
LRLGPSFCRDYPFEVVSNYGSGGDPSDRGRRHHTQPAATVTGKITRNRVVDSFGVDRGRF
SSSEAGLLQTFPHDFPWSGKDIAQQIGNAIPPRLGVHVISAALGIQFNPEMIDRVVTMSW
AESAGALAP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccatcccgccgcgtccctcaagcagcggaaacatccccagatagtcgacctc
ttcgcaggcccaggtggtctagacgtagcagctcactggttgggcattccaaccatcggc
atcgaatgggatgatggcgcatgcgcgacacgtagtgcggctggaattctcacccgccag
ggagacgtgcgcaggttctcgccatccgactttcaagcagctaccgtcctggccgcagga
cctccgtgccagaccttcaccgtcgcgggcacagggagcggcaggaaggcccttgatgac
gtcctgaccttcgtcaaacagatgtcggcgggcgaagacgtatcgagcgccgtgagtcaa
ctggcggatgaacgtacaggtctggtactcgaaccccttaggtggctattagaggcgaat
acggtcagccgaccgtatgacgccgtcattcttgagcaggtgcccgctgtgttgcccgtg
tgggaagcatacgaggaggcgctgcaatcgatgggtgtcggttacaagacgtgttcaggc
gttctgaagactgaggcctttggtgttccccagactcggcggcgcgctgtgctcatcgcg
agccgatattttcagcctgagctccctgctgagactcacgagcggtttcggctccggcac
tccgcccgactgaacaccctcacgaacggtcgtcgaccttgtgtcagcatccaggacgca
cttcgcctcgggccatcgttttgtcgtgactacccgttcgaggttgtctccaattacggg
tccggtggagatccgagcgacagaggtcgccgccatcacactcaacccgcagcaactgtg
accggcaagatcacccgcaaccgggtcgtggactccttcggcgtggaccgcgggcgcttt
tccagcagcgaagccggtctgctgcagacattcccacacgacttcccatggtcagggaag
gatatcgctcaacagatcggcaacgcgatcccacctcgcctcggtgttcacgtcatcagc
gcagcccttgggatccagttcaatccagaaatgatcgatcgggtggtgacgatgtcctgg
gcggagtcagcgggtgctctcgctccgtaa
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