Gulosibacter sediminis: M3M28_09225
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Entry
M3M28_09225 CDS
T08132
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
gsd
Gulosibacter sediminis
Pathway
gsd00190
Oxidative phosphorylation
gsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
M3M28_09225
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M3M28_09225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsd03019
]
M3M28_09225
Enzymes [BR:
gsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
M3M28_09225
Messenger RNA biogenesis [BR:
gsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M3M28_09225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
UQN14229
LinkDB
All DBs
Position
2002236..2004350
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AA seq
704 aa
AA seq
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MDTGTPVTNDTIGLDRYIDRETSWLAFNQRVLELGEDANVPLLERTNFMAIFPSNLDEWF
MVRVAGLKRRIDTGLAVPTPAGVPPRQELATIRASARDLQIRHAEHFRDEIRPKLAAEGI
HILAWNDLSAEQQAKLTEIFGTEIFPVLMPLAVDPAHPFPYISGLSLNLSVRVQNPDAGK
AEFARLKVPPMLPRLFPLDSPEGETWYILLEDLIAQHLDALFPGMQVLDHHAFRVTRNED
VTIEEDETENLLQALEKELLRRRFGPPIRLEVSEDMDDETLALLKDELDVDNDAVTVLPS
PLDLTSLFALGRINRPDLKFETHVPVTHPAFRTSDSDESADMFRAIAERDVLVHHPYESF
STSVVEFIEQAAADPDVLAIKQTLYRTSGDSPIIAALIKAAESGKQVLALVEIKARFDEQ
NNIVWARKLEKAGVHVVYGLVGLKTHCKLLQVLRREDGKLRAYNHIGTGNYNPKTSRIYE
DLGLFTCDPEVSGDVTRLFNQLSGYAIERDFKRLLVAPLHLRKGLLDLIERERQAALRGE
ESRIRIKVNSMVDEEIIDALYAAAQAGVPVDIYVRGICGIRPGVPGLSETIRVRSVVGRY
LEHSRIFTFHNGGDTHTYIGSADMMHRNLDRRIEALVRLADPHHVKELEDFFDMGMSNDY
ATWALEASGEWVRRSVDENGRRLPELHDELMRRIQARPMRHALR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggaacccccgtgacgaacgacacgatcggcctcgaccgctacatcgaccgc
gagaccagctggctcgcgttcaaccagcgcgtgctcgagctcggcgaggacgccaacgtg
ccgctgctggagcgcacgaactttatggcgatcttcccctcgaacctcgacgagtggttc
atggtgcgcgtcgcgggcctgaagcgccgcatcgacaccggcctcgccgtgccgaccccg
gcgggcgtccccccacgccaggagctcgcgaccatccgcgcctccgcgcgcgacctccag
attcgccacgccgagcacttccgcgacgagatccggccgaagctcgcggccgagggcatc
cacattctcgcctggaacgacctcagcgccgagcagcaggcgaagctcaccgagatattc
ggcaccgagatcttccccgtgctcatgccgctcgcggtcgaccccgcgcacccgttcccc
tacatttcgggcctctcgctcaacctctcggtgcgcgtgcagaacccggatgcgggcaag
gccgaattcgcgcggctcaaggtgccgcccatgctgccgcgcctcttccccctcgactct
cccgagggcgagacctggtacatcctgcttgaagacctcatcgcacagcacctcgacgcg
ctcttccccggcatgcaggtgctcgaccaccacgccttccgcgtcacccgcaacgaagac
gtgacgatcgaagaagacgaaaccgagaacctcctccaggccctcgagaaggagctgctg
cgtcgccgcttcggcccgccgatccgccttgaggtgtcggaagacatggacgacgagacc
ctcgccctgctcaaggacgaactcgacgtcgacaacgacgcagtcacggtgctgccgagc
ccgctcgacctcacctcgctcttcgcgctcggccgcatcaaccgccccgacctcaagttc
gagacgcacgtgccggtgacgcaccccgcgttccgcacctccgactccgacgagtcggcc
gacatgttccgcgcgattgccgagcgggatgtgctcgtgcaccacccgtacgagtcgttc
tccaccagcgtggtcgagttcatcgagcaggccgcagccgatccggatgtgctcgccatc
aagcagacgctctaccgcacctcgggcgactcgccgatcatcgcggcgctcatcaaggcg
gccgagtcgggcaagcaggtgctcgcgctcgtcgagattaaggcgcgcttcgacgagcag
aacaacatcgtctgggcccgcaagctcgagaaggccggcgtgcacgtcgtctacggcctc
gtcggcctgaagacccactgcaagctgctgcaggtgctgcgccgcgaagacggcaagctg
cgtgcctacaaccacatcggcacgggcaactacaacccgaagacctcgcgcatctacgag
gacctcggcctgttcacctgcgaccccgaggtctcgggcgacgtcacccgcctgttcaac
cagctctcgggctacgcgatcgagcgcgacttcaagcgcctgctcgtcgcaccgctgcac
ctgcgcaaggggctgctcgacctcatcgagcgcgagcgccaggcagcgcttcgcggtgag
gaaagccgcatccgcatcaaggtgaactcgatggtcgacgaggagatcatcgacgccctc
tacgccgcggcgcaggcgggcgtaccggtcgacatctacgtgcgcggcatctgcggcatc
cgccccggcgtgcccggcctcagcgagacgatccgcgtgcgctcggtcgtcggccgctac
ctcgagcactcgcgcatcttcacgttccacaacggcggcgacacgcacacctacatcggc
tcggccgacatgatgcaccgcaacctcgaccgtcgcatcgaagcactcgtgcgcctcgcc
gacccgcaccacgtcaaggagctcgaggacttcttcgacatgggcatgtcgaacgactac
gcgacctgggcgctcgaggcgagcggcgagtgggtgcgccgcagcgtcgacgagaacggt
cgccggctgcccgagctccacgacgagctgatgcgtcgcatccaggcgcgaccgatgcgc
cacgccctgcgttag
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