Geobacillus stearothermophilus: GT50_02225
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Entry
GT50_02225 CDS
T04043
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
gse
Geobacillus stearothermophilus
Pathway
gse03030
DNA replication
gse03430
Mismatch repair
gse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT50_02225 (polC)
03430 Mismatch repair
GT50_02225 (polC)
03440 Homologous recombination
GT50_02225 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gse03032
]
GT50_02225 (polC)
03400 DNA repair and recombination proteins [BR:
gse03400
]
GT50_02225 (polC)
Enzymes [BR:
gse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT50_02225 (polC)
DNA replication proteins [BR:
gse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GT50_02225 (polC)
DNA repair and recombination proteins [BR:
gse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GT50_02225 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
DUF1409
Zn-ribbon_8
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ALA69127
LinkDB
All DBs
Position
complement(427146..431480)
Genome browser
AA seq
1444 aa
AA seq
DB search
MMLRGEQTDVMVTKEQKERFLILLEQLKMTSDEWMPHFREAAIRKVVIDKEEKSWHFYFQ
FDNVLPVHVYKTFADRLQTAFRHIAAVRHTMEVEAPRVTEADVQAYWPLCLAELQEGMSP
LVDWLSRQTPELKGNKLLVVARHEAEALAIKRRFAKKIADVYASFGFPPLQLDVSVEPSK
QEMEQFLAQKQQEDEERALAVLTDLAREEEKAASAPPSGPLVIGYPIRDEEPVRRLETIV
EEERRVVVQGYVFDAEVSELKSGRTLLTMKITDYTNSILVKMFSRDKEDAELMSGVKKGM
WVKVRGSVQNDTFVRDLVIIANDLNEIAANERQDTAPEGEKRVELHLHTPMSQMDAVTSV
TKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNET
HRRLSEETYVVFDVETTGLSAVYNTIIELAAVKVKDGEIIDRFMSFANPGHPLSVTTMEL
TGITDEMVKDAPKPDEVLARFVDWAGDATLVAHNASFDIGFLNAGLARMGRGKIANPVID
TLELARFLYPDLKNHRLNTLCKKFDIELTQHHRAIYDAEATGHLLMRLLKEAEERGILFH
DELNSRTHSEASYRLARPFHVTLLAQNETGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKH
RDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYKPLIEMDYVKDEEMI
KNIIRSIVALGEKLDIPVVATGNVHYLNPEDKIYRKILIHSQGGANPLNRHELPDVYFRT
TNEMLDCFSFLGPEKAKEIVVDNTQKIASLIGDVKPIKDELYTPRIEGADEEIREMSYRR
AKEIYGDPLPKLVEERLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSF
VATMTEITEVNPLPPHYVCPNCKHSEFFNDGSVGSGFDLPDKNCPRCGTKYKKDGHDIPF
ETFLGFKGDKVPDIDLNFSGEYQPRAHNYTKVLFGEDNVYRAGTIGTVADKTAYGFVKAY
ASDHNLELRGAEIDRLAAGCTGVKRTTGQHPGGIIVVPDYMEIYDFTPIQYPADDTSSEW
RTTHFDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPDVMGIFSSTEPLG
VTPEQIMCNVGTIGIPEFGTRFVRQMLEETRPKTFSELVQISGLSHGTDVWLGNAQELIQ
NGTCTLSEVIGCRDDIMVYLIYRGLEPSLAFKIMESVRKGKGLTPEFEAEMRKHDVPEWY
IDSCKKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLLYYASYFTVRAEDFDLDAMIKGSPA
IRKRIEEINAKGIQATAKEKSLLTVLEVALEMCERGFSFKNIDLYRSQATEFVIDGNSLI
PPFNAIPGLGTNVAQAIVRAREEGEFLSKEDLQQRGKLSKTLLEYLESRGCLDSLPDHNQ
LSLF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgagaggggaacaaacggacgtcatggtgacaaaagagcaaaaagagcggttt
ctcatcctgcttgagcagctgaagatgacgtcggacgaatggatgccgcattttcgtgag
gcagccattcgcaaagtcgtgatcgataaagaggagaaaagctggcatttttattttcag
ttcgacaacgtgctgccggttcatgtatacaaaacgtttgccgatcggctgcagacggcg
ttccgccatatcgccgccgtccgccatacgatggaggtcgaagcgccgcgcgtaactgag
gcggatgtgcaggcgtattggccgctttgccttgccgagctgcaagaaggcatgtcgccg
cttgtcgattggctcagccggcagacgcctgagctgaaaggaaacaagctgcttgtcgtt
gcccgccatgaagcggaagcgctggcgatcaaacggcggttcgccaaaaaaatcgctgat
gtgtacgcttcgtttgggtttcccccccttcagcttgacgtcagcgtcgagccgtccaag
caagaaatggaacagtttttggcgcaaaaacagcaagaggacgaagagcgagcgcttgct
gtactgaccgatttagcgagggaagaagaaaaggccgcgtctgcgccgccgtccggtccg
cttgtcatcggctatccgatccgcgacgaggagccggtgcggcggcttgaaacgatcgtc
gaagaagagcggcgcgtcgttgtgcaaggctatgtatttgacgccgaagtgagcgaatta
aaaagcggccgcacgctgttgaccatgaaaatcacagattacacgaactcgattttagtc
aaaatgttctcgcgcgacaaagaggacgccgagcttatgagcggcgtcaaaaaaggcatg
tgggtgaaagtgcgcggcagcgtgcaaaacgatacgttcgtccgtgatttggtcatcatc
gccaacgatttgaacgaaatcgccgcaaacgaacggcaagatacggcgccggaaggggaa
aagagggtcgagctccatttgcataccccgatgagccaaatggacgcggtcacctcggtg
acaaaactcattgagcaagcgaaaaaatgggggcatccggcgatcgccgtcaccgaccat
gccgttgttcagtcgtttccggaggcctacagcgcggcgaaaaaacacggcatgaaggtc
atttacggccttgaggcgaacatcgtcgacgatggcgtgccgatcgcctacaatgagacg
caccgccgtctttcggaggaaacgtacgtcgtctttgacgtcgagacgacgggcctgtcg
gctgtgtacaatacgatcattgagctggcggcggtgaaagtgaaagacggcgagatcatc
gaccgattcatgtcgtttgccaaccctggacatccgttgtcggtgacaacgatggagctg
actgggatcaccgatgagatggtgaaagacgccccgaagccggacgaggtgctagcccgt
tttgttgactgggccggcgatgcgacgcttgttgcccacaacgccagctttgacatcggt
tttttaaacgcgggcctcgctcgcatggggcgcggcaaaatcgcgaatccagtcatcgat
acgctcgagctggcccgttttttatacccggatttgaaaaaccatcggctcaatacattg
tgcaaaaaatttgacattgaattgacgcagcatcaccgcgccatctacgacgcggaggcg
accgggcatttgcttatgcggctgttgaaggaagcggaagagcgcggcatactgtttcat
gacgaattaaacagccgcacgcacagcgaagcgtcctatcggcttgcgcgcccgttccat
gtgacgctgttggcgcaaaacgagactggattgaaaaatttgttcaagcttgtgtcattg
tcgcacattcaatattttcaccgtgtgccgcgcatcccgcgctccgtgctcgtcaagcac
cgcgacggcctgcttgtcggctcgggctgcgacaaaggagagctgtttgacaacttgatc
caaaaggcgccggaagaagtcgaagacatcgcccgtttttacgattttcttgaagtgcat
ccgccggacgtgtacaagccgctcatcgagatggattatgtgaaagacgaagagatgatc
aaaaacatcatccgcagcatcgtcgcccttggtgagaagcttgacatcccggttgtcgcc
actggcaacgtccattacttgaacccagaagataaaatttaccggaaaatcttaatccat
tcgcaaggcggggcgaatccgctcaaccgccatgaactgccggatgtatatttccgtacg
acgaatgaaatgcttgactgcttctcgtttttagggccggaaaaagcgaaggaaatcgtc
gttgacaacacgcaaaaaatcgcttcgttaatcggcgatgtcaagccgatcaaagatgag
ctgtatacgccgcgcattgaaggggcggacgaggaaatcagggaaatgagctaccggcgg
gcgaaggaaatttacggcgacccgttgccgaaacttgttgaagagcggcttgagaaggag
ctaaaaagcatcatcggccatggctttgccgtcatttatttgatctcgcacaagcttgtg
aaaaaatcgctcgatgacggctaccttgtcgggtcgcgcggatcggtcggctcgtcgttt
gtcgcgacgatgacggaaatcaccgaggtcaatccgctgccgccgcattacgtttgcccg
aactgcaagcattcggagttctttaacgacggttcagtcggctcagggtttgatttgccg
gataaaaactgcccgcgatgtgggacgaaatacaagaaagacgggcacgacatcccgttt
gagacgtttctcggctttaaaggcgacaaagtgccggatatcgacttgaacttttccggc
gaataccagccgcgcgcccacaactatacgaaagtgctgtttggcgaagacaacgtctac
cgcgccgggacgattggcacggtcgctgacaaaacggcgtacggatttgtcaaagcgtat
gcgagcgaccataacttagagctgcgcggcgcggaaatcgaccggctcgcggctggctgc
accggggtgaagcggacgaccgggcagcatccgggcggcatcatcgtcgtcccggattat
atggaaatttacgattttacgccgattcaatatccggccgatgacacgtcctctgaatgg
cggacgacccatttcgacttccattcgatccacgacaatttgttgaagctcgatattctc
gggcacgacgatccgacggtcattcgcatgctgcaagatttaagcggcatcgatccgaaa
acgatcccgaccgacgacccggatgtgatgggcattttcagcagcaccgagccgcttggc
gttacgccggagcaaatcatgtgcaatgtcggcacgatcggcattccggagtttggcacg
cgcttcgttcggcaaatgttggaagagacaaggccaaaaacgttttccgaactcgtgcaa
atttccggcttgtcgcacggcaccgatgtgtggctcggcaacgcgcaagagctcattcaa
aacggcacgtgtacgttatcggaagtcatcggctgccgcgacgacattatggtctatttg
atttaccgcgggctcgagccgtcgctcgcttttaaaatcatggaatccgtgcgcaaagga
aaaggcttaacgccggagtttgaagcagaaatgcgcaaacatgacgtgccggagtggtac
atcgattcatgcaaaaaaatcaagtacatgttcccgaaagcgcacgccgccgcctacgtg
ttaatggcggtgcgcatcgcctactttaaggtgcaccatccgcttttgtattacgcgtcg
tactttacggtgcgggcggaggactttgaccttgacgccatgatcaaaggatcacccgcc
attcgcaagcggattgaggaaatcaacgccaaaggcattcaggcgacggcgaaagaaaaa
agcttgctcacggttcttgaggtggccttagagatgtgcgagcgcggcttttcctttaaa
aatatcgatttgtaccgctcgcaggcgacggaattcgtcattgacggcaattctctcatt
ccgccgttcaacgccattccggggcttgggacgaacgtggcgcaggcgatcgtgcgcgcc
cgcgaggaaggcgagtttttgtcgaaggaggatttgcaacagcgcggcaaattgtcgaaa
acgctgctcgagtatctagaaagccgcggctgccttgactcgcttccagaccataaccag
ctgtcgctgttttag
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