Geotrypetes seraphini (Gaboon caecilian): 117345905
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Entry
117345905 CDS
T09159
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03020
RNA polymerase
gsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117345905 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
117345905 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117345905 (POLR2B)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117345905 (POLR2B)
Enzymes [BR:
gsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117345905 (POLR2B)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117345905 (POLR2B)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117345905 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
117345905
NCBI-ProteinID:
XP_033771075
UniProt:
A0A6P8NPZ5
LinkDB
All DBs
Position
1:complement(370430788..370594064)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDAEEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEDPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVVKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSIIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESMNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFVGPTYYQRLKHMVDDKIHSRARGPLQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSF
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcagaagaggatatacagtatgatgaggatgatgatgaaatcactcctgat
ctatggcaagaagcttgttggattgttatcagctcctactttgatgaaaaaggtctggtg
cgccagcagcttgactcctttgatgagttcattcagatgtctgtgcagaggattgtggag
gatgccccaccgatagatctacaggctgaagctcagcacgcaactggagaagttgaagat
ccgccaaggtacctgttgaagtttgaacagatttatctctctaagcctacacactgggag
cgagatggtgccccctcgccaatgatgccaaatgaagcaagactgagaaacctcacgtat
tcagcgccactgtatgtggatattacaaagacagttgtgaaggagggtgaagaacagctg
cagacccagcatcagaaaacttttattgggaagatcccaataatgttgcgttccacctac
tgcctgctgaatggcctgactgaccgcgatctctgtgagctgaatgaatgccccctagac
ccaggaggctattttatcataaatggatcagaaaaggttctgattgctcaggagaagatg
gctacaaacacagtgtatgtgtttgcaaagaaggattctaaatatgcttacacagcagaa
tgtagatcttgtctggagaattcctccagaccaacaagcactatctgggtcagcatgctg
gcaagaggcggacagggtgcaaagaagagtgcaattggtcagcgcattgtggccactttg
ccgtacatcaaacaagaagtgcccatcataattgttttccgtgcactaggttttgtatct
gacagagacattctggagcacattatttatgactttgaagatcctgagatgatggaaatg
gttaagccttcactggatgaagcctttgttattcaggagcaaaatgttgccctcaacttc
attggctctagaggagcaaagcctggtgttacgaaagagaagagaatcaaatatgccaaa
gaagtcctgcagaaagaaatgctgccccatgtcggtgttagtgacttctgtgaaacaaag
aaagcttattttttggggtacatggttcacaggttactgctggcagctttgggcagaaga
gagctggatgatagagatcactatggaaacaagaggttggacctagcagggcctctgttg
gcctttctcttcagaggaatgtttaagaacttgctaaaagaagtgagaatatatgcacag
aaattcattgacagagggaaagattttaacttggagctggcaattaaaaccaggattatt
tcggatggattgaaatattctttggctacagggaattggggtgatcagaagaaagctcac
caggctcgtgctggagtatctcaggtgttgaaccgactgacatttgcatctacactctct
catttacggcggttgaattctcctattggtagagatggtaaactggcaaaaccccggcag
ctgcacaataccttgtgggggatgatctgccctgccgagactccagagggtcatgcagta
ggtcttgtcaagaacttggctttgatggcttacatttctgttggatctcaaccatcccca
attctggaatttttagaggaatggagtatggagaatctggaagaaatttctcctgcggcc
attgctgatgcaaccaaaatctttgtgaatggatgttgggtgggaatacacaaggaccca
gagcaactgatgaacacactaaggaagttgcgacgacagatggatatcattgtgtctgag
gtctctatgatcagggatataagggagcgagagattcggatctacacggatgcaggccgc
atctgtaggccgttgcttattgttgaaaaacaaaagttgctactgaagaagagacatatt
gatcaattaaaggagcgggagtataacaactacagttggcaggatctggtggccagtggt
gtagtggaatatattgacacactagaagaagagacagtgatgctagcaatgaccccagat
gaccttcaggaaaagggagttgcttactgctcaacttacacacactgtgagattcaccca
tccatgatcttaggggtgtgtgcatctatcattccattcccagatcacaaccagtctcct
aggaacacataccagtctgctatggggaagcaggccatgggggtttatattaccaacttc
catgttcgtatggacaccctggctcatgtgctgtattacccacagaaaccacttgtgaca
acacgttccatggagtaccttcgcttcagagagctgcctgcaggtatcaactcaattgtg
gcgattgcctcttacactggatataatcaggaagactccatcatcatgaatcgttcagct
gttgacagaggctttttcaggtctgttttctatcgttcctacaaagagcaagagtccaag
aaaggatttgaccaggaggaggtttttgagaaacctacacgagaaacatgtcaggggatg
aggcatgcaatctatgacaagctggatgatgatgggttgattgcaccaggggtgcgtgta
tcgggagatgatgtcatcattggtaagactgtgacactgcctgaaaatgaagatgagctg
gagagcatgaacaggcgttacacaaagagagattgtagcactttcctccgcaccagcgag
acgggcattgtggaccaggtcatggtaacccttaaccaggaaggttataagttctgcaaa
atccgagtacgttctgtccgaatccctcagattggagataaatttgccagtcgacatggt
cagaagggtacatgtggtatccagtacagacaagaggatatgccttttacctgtgaggga
attacaccagacattatcatcaacccacatgccattccttctcgtatgacaattggtcac
ttgattgaatgtcttcaagggaaggtgtcagcaaacaaaggagaaataggcgatgccaca
ccatttaatgatgctgtcaacgtgcagaagatttcaaatttgctgtctgattatggctat
cacctgagagggaatgaggttctctacaatggattcactggtcgcaagatcacatcacag
attttcgtgggacctacctattaccagcgtttaaagcatatggtggatgacaaaattcat
tcccgtgcccggggacctctacaaattctcaacaggcagcccatggagggcagatcccgg
gatggtggcctgcgttttggggaaatggagcgagactgccagattgctcatggtgcagcc
cagtttcttaaggaaagactgtttgaagcctcagatccataccaagttcatgtgtgcaat
ctgtgtggaataatggcaatagccaacactagaacacatacatacgagtgcagaggatgt
cgcaacaaaacacagatttccttggtgagaatgccatatgcctgtaaactcctgtttcaa
gaactgatgtccatgagcattgcaccacgtatgatgtcattttaa
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integrated database retrieval system
