Geotrypetes seraphini (Gaboon caecilian): 117346798
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Entry
117346798 CDS
T09159
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117346798 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gsh04090
]
117346798 (VCAM1)
04091 Lectins [BR:
gsh04091
]
117346798 (VCAM1)
CD molecules [BR:
gsh04090
]
Proteins
117346798 (VCAM1)
Lectins [BR:
gsh04091
]
I-type lectins (Siglecs)
117346798 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_5
Ig_4
C2-set
Izumo-Ig
Ig_6
Receptor_2B4
C2-set_2
V-set_CD47
C1-set
ICAM1_3_5_D2
BTD
ICAM_N
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
117346798
NCBI-ProteinID:
XP_033772787
UniProt:
A0A6P8NAP0
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All DBs
Position
12:complement(14249909..14277676)
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AA seq
714 aa
AA seq
DB search
MAGALLTVTLSLHLLMTVLAFEIELIPPVPKITAHFGEPLVLTCRATGCDSPRFVWRTEM
DFPLAAVVQTKGTHSNLTMKHIGFEHERLYICTAMCTDFPSEQKRITIEIYSFPSDPIIT
TSSVLVAGTDSLITCTVPDVFPSDLLEVQLVKDGQILGELPYDSERSRKTKNLSIEFIPI
PEDDGKEFICLARLSFDDAKKEPQQRQSTKKIIVNYAPQNAAITVTPSSTIREGESLILS
CMAQGNPPVRITWRKQSAHKNISLLEGNDSITIPSAEFSDSGLYVCEVTNSAGSALVHKE
VSVQGEPKIPHLSILPSTTVKEGDNVTVQCFAEGNPAAKITLRKKSKEGETVLQGASGIV
HIPFAQRQDAGVYECEAENAFGTKTSSASLSVEFGPIIDIFTQPSPEVKEGDAVIFICNS
SGNPAPEVSWKKYSASGTSHLISKEATLMLKDVKMGDSGLYECEGINQHGKDRRTVELVV
QVPPRETSLTVMPSETVKEGDPVVISCRSVGVPSPHIILSKRVENGDMMLKSEDGIYTIQ
RVQEEHAGTYKCEATNKFGQHSRTITLNVKVPPRNTIVFVSPSENVTEGDNVTITCRTYC
NPLPLIILKKVFPENETIQSSNNGIFTLYNVTKSDTGTYVIDVSNDVGNDTEIIEISVLE
KMEDPKSNSLVITLLCVLSLAVTSAAIAGIVLYKCQQERLKGFYSLVDALRMRV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagcacttttaacagtgacactgtccctacacctgttaatgactgttctagct
ttcgagattgagctcatccccccggtgcccaagataacagctcactttggagaacccctg
gtgctgacgtgcagggccactggctgtgactccccacgtttcgtttggagaaccgaaatg
gactttccgctggccgctgtggtacaaaccaaagggactcactccaacctgaccatgaaa
cacattggatttgagcacgagcgtctgtacatctgcactgccatgtgcacggattttcct
agcgagcaaaagaggataacaattgaaatttattcattccccagtgatcccatcattact
accagttcagtcctcgtggctgggacagactctctgatcacctgtacagttcccgatgtt
tttccatctgacctgctagaggtgcagctggtgaaagacggacagattttgggggagttg
ccatacgacagcgagagaagccgaaagaccaagaatctgtcgattgaatttattcctatc
cctgaagatgatggaaaagagttcatttgcctggccagattatcttttgatgatgcaaag
aaagaacctcagcaaagacaaagcacaaagaaaatcatagtgaactatgcaccacaaaat
gctgccattacggtaactccatccagcacaataagagaaggggagagtctgatacttagt
tgtatggctcagggcaacccaccagtcaggattacctggagaaaacaatcggctcataaa
aatatttcgctgcttgaaggaaatgacagtattaccattcccagtgcagagttcagcgat
tcgggcttatatgtctgcgaggtcacgaattcagcagggagtgcacttgtacataaagaa
gtttctgtgcaaggggaaccgaagattcctcacttgtccatacttccttccaccactgtt
aaagaaggagacaacgttacagttcagtgttttgctgaaggcaacccagctgccaaaata
acgttgaggaaaaaatcaaaagagggagagactgtgctgcagggcgccagtggcatcgtt
catatcccgtttgcgcagcgtcaggatgcaggagtttacgaatgtgaggctgagaatgct
ttcggaacgaagacaagctctgcatctctttctgtggaatttgggccaatcattgacatt
ttcacacagccatcccctgaagtgaaggaaggggatgctgtaattttcatatgcaacagc
agtggcaatcctgccccagaggtttcctggaaaaagtattctgcatcaggaacctcccac
cttatttctaaagaggcaactttaatgttaaaggatgtaaaaatgggtgattctggcctt
tatgaatgtgaaggaattaaccagcatggaaaagacagaagaaccgtggaattagttgtt
caagttccaccacgtgaaacaagtcttacagttatgccctccgaaactgtcaaggaagga
gaccctgttgttatctcctgcagatctgtgggggtgccatctccacatattatcctgagc
aagagagtggagaatggagatatgatgctcaagtctgaagatggcatatacacaatacaa
agggttcaagaggaacatgcaggaacttacaagtgtgaagccacaaataaatttggacag
cattcaagaactataacactcaatgtcaaagttcctccccgaaacacaatcgtgtttgta
tctccctctgaaaatgttacagaaggagacaatgtgaccattacatgtagaacctactgc
aaccctctcccactcattatcctgaagaaggtcttcccagaaaatgaaaccatccagtct
tcaaacaatgggattttcaccctctacaatgtgaccaaaagcgatactggcacctatgtc
attgatgtttccaatgatgttggaaatgataccgaaataatagaaatttctgttttagaa
aaaatggaggatccaaaatctaactctctggtaatcacgcttctctgtgtgttatcccta
gcagttactagtgctgccattgcaggaatagtgctttacaaatgccaacaagagaggtta
aaaggcttctacagtttagtcgatgcactgagaatgagagtatga
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