Geotrypetes seraphini (Gaboon caecilian): 117352539
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Entry
117352539 CDS
T09159
Symbol
PRDM6
Name
(RefSeq) LOW QUALITY PROTEIN: putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00310
Lysine degradation
gsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117352539 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117352539 (PRDM6)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117352539 (PRDM6)
Enzymes [BR:
gsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
117352539 (PRDM6)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117352539 (PRDM6)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117352539 (PRDM6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
117352539
NCBI-ProteinID:
XP_033784898
UniProt:
A0A6P8QCA1
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All DBs
Position
1:complement(525751962..526040454)
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AA seq
532 aa
AA seq
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MAMLKPGDPGGSTFLKLDPSYPQHWQRLVPQSALKSGALSLLQPPDSSHRPAALSSSSSS
SLRGITPGPAAGFGALPPSSDAPAPPRKEPPSAKGPEKGPARPRCSSEELDYYLYGQQRM
EIIPLSNPTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSTSAVAPPPEVPEWLRD
LPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVILSPEKVQAGAVRNTQHLWEIYD
QDGTLQHFIDGGEPXKSSWMRYVRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVW
YNDSYTSFFGIPLQCIAQDENLNVPSPVMEAMSRQDPLQPFNKNNKLPSTALQRSIVFPQ
TPCSRNFSLLDKSGPAEGGFNQVNIKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFT
QRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATT
LNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgaagccgggggatcccgggggctcgaccttcctgaagctcgacccgtcc
tacccgcagcactggcagcgcctcgtcccgcagagcgccctgaagagcggagccttgagc
ctcctgcagccgccggacagcagccatcggccggccgccctctcctcctcctcctcctcc
tccctgcggggcatcacccccgggccagccgccggtttcggggcgttgccccccagctcc
gacgccccggccccgcccaggaaagagccgcccagcgccaagggcccggagaaggggccg
gcccgcccgcggtgcagctccgaggaactggactattatttgtacggccagcaacggatg
gagatcatccccctcagcaaccccaccagcgaccccaacaaccgttgcgacatgtgcgca
gataaccgtaacggtgagtgtcccatgcacgggcccctgcattcgctgcgccgcctggtg
ggcaccagcagcacttcagccgtcgcacctcctcctgaggtccccgagtggctgcgggac
ctgcctcgggaggtctgtctctgtaccagcactgtgcccggactggcctatggcatttgt
gccgctcaaaggatccagcagggcacgtggattggcccattccagggagtcatcctgtcg
ccggagaaggtgcaagccggggccgtcaggaacacacagcacttgtgggaaatatacgat
caagatgggaccctacagcactttatcgatggtggggagccangtaagtcaagctggatg
aggtacgtccgatgtgcaagacattgtggggagcagaacctaacagtagttcagtacagg
tcaaacatattttacagagcatgcatcgatatccccaggggcacggagctcttagtatgg
tacaatgatagttacacatccttctttggaatccctttgcagtgcatcgcgcaagatgaa
aacttgaatgtcccttcccctgtgatggaggccatgtccagacaagatccactgcagccc
tttaacaaaaataataaactaccctccactgccctgcaacggtccattgtatttccacag
actccatgcagcagaaatttttctcttttggataagtctgggccagctgagggcggattt
aaccaggtcaacataaaaaaccagcgagttcttgcaagcccgacttcaactagccaactc
aattctgagttcagtgactggcacctgtggaagtgtgggcagtgctttaaaacgttcacc
cagcgtattctcttacagatgcacgtctgcacacagaatccagacaggccttatcagtgc
ggccattgctcccagtccttctcccagccatcagaactgaggaatcatgttgtcacccac
tccagtgacagacctttcaagtgcggctattgtggtcgtgcctttgctggtgctacgaca
ctcaacaaccacatccggactcacacaggggaaaagccttttaagtgcgagaggtgtgag
aggagcttcacacaggccacccagctgagccgacaccagaggatgcccaatgagtgcaag
ccaataacagagagcacagaatcaattgaagtggattaa
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