Geotrypetes seraphini (Gaboon caecilian): 117355661
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Entry
117355661 CDS
T09159
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117355661 (CDKAL1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117355661 (CDKAL1)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117355661 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
117355661
NCBI-ProteinID:
XP_033790450
UniProt:
A0A6P8QV71
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Position
2:complement(187777874..189257857)
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AA seq
580 aa
AA seq
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MPAICESVLEDIEDIVSEQDPKPHDRQFSRKSIVPRVRKRSKAKSIQMMEEEEPLSDSII
PGTQKIWVRTWGCSHNNSDGEYMAGQLAAYGYKITEKPEEADLWLLNSCTVKSPAEDHFR
NSIKKAQDEHKKVVLAGCVPQAQPRQEYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLLG
QKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGILASYPIYELVN
RAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGALLRLGMTNPPYILE
HLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFRHVVDFLKEKVPGITVAT
DIICGFPGETDEDFQATMKLVEEYQFPSLFINQFYPRPGTPAAKLVQVPAHVKKQRTKEL
SQLFHSYRPYNHKIGERQQVLVTEESFDSRYYVAHNCFYEQVLVPKNSEFMGKMVEVDIY
EAGKHFMKGQPTSNSRVYTPSVTKPLAQGEVSGLTEEFRALMKSGLASKARTSVEIQKPS
LCSRLQLPLPWRGEGDRLKMLSLSLALLVVAIAFLIAVLG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatttgcgagtctgtgctagaagacattgaagatattgtctcggaacaagat
ccaaaacctcatgatcgtcagttttcaagaaaaagcattgttccaagagtgcggaagagg
agcaaagcaaaaagcattcaaatgatggaggaagaggaacccctaagcgatagcattatc
cctggtacacagaaaatctgggtccgaacctggggctgctcccacaacaactctgatgga
gaatacatggcagggcagctggcagcatatggctataagataacagaaaaaccagaagaa
gcagatttgtggctgctgaacagctgcacggtgaaaagtccagcagaagatcacttcaga
aattcaattaagaaagctcaagatgaacacaaaaaagtggttttggcaggctgtgtccct
caagcccagccccggcaagagtatatgaaaggcctgagcatcataggggttcaacaaata
gatcgtgtagtagaagttgtggaggaaaccattaaaggtcattcagtaagactgctgggt
cagaaaaaggataatggaaagcggttggggggagctcgattggatttgccaaagattagg
aagaacccactgatagaaatcatttccatcaatacagggtgtctcaatgcatgcacttac
tgcaaaactaaacatgctagaggaatcctggcgagttatccaatttatgagttggtcaat
cgagcaaagcagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacact
ggagcctatggcagagacattggcacagatctcccaacactcctatggaagcttgtggaa
gtgattcctgagggagctttgctgagacttggcatgacaaaccctccctatattttagaa
catctggaggagatggcaaaaatactgaatcacccaagagtatatgctttccttcatata
ccagtgcaatctgcatctgacagcgtgctcatggacatgaagagagagtactgcgttgca
gacttcaggcatgttgtggatttcctaaaagaaaaagtgccaggtattactgtcgctaca
gacatcatttgcggttttccaggggaaacggatgaagattttcaagcaacaatgaaactt
gtggaggaatatcaatttccaagtctttttattaatcagttttacccacgcccggggacc
ccagctgcaaaactagtgcaagttccggcacatgtgaaaaagcaaagaacaaaggaactg
tcccagctgtttcattcatacagaccatataaccacaagattggtgagagacagcaggtg
ttggtaacagaagaatccttcgattcccggtattatgttgctcacaattgtttttatgag
caggttcttgtgccaaaaaactctgaatttatgggcaaaatggtagaagtggatatttat
gaagcaggaaagcacttcatgaagggtcagcccacatcaaattccagagtatacacccca
tctgtcaccaagccactagcacaaggtgaagtttctggcttaacagaggagttcagagcc
ttgatgaagagtggccttgcttcaaaagcacgcacctcagttgagattcagaagccctct
ttatgctccaggttgcagctgccgctgccatggagaggagaaggggaccggttgaagatg
ctttctctcagccttgctcttcttgttgtagcaattgcatttctcattgctgtgctaggc
taa
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