Geotrypetes seraphini (Gaboon caecilian): 117362023
Help
Entry
117362023 CDS
T09159
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03410
Base excision repair
gsh04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117362023 (PARP4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117362023 (PARP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsh03032
]
117362023 (PARP4)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117362023 (PARP4)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117362023 (PARP4)
Enzymes [BR:
gsh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
117362023 (PARP4)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117362023 (PARP4)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117362023 (PARP4)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117362023 (PARP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VWA
VIT_2
VWA_2
BRCT
BRCT_2
PARP_reg
VWA_CoxE
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
117362023
NCBI-ProteinID:
XP_033803641
UniProt:
A0A6P8R032
LinkDB
All DBs
Position
6:40598430..40771050
Genome browser
AA seq
1783 aa
AA seq
DB search
MAVGIFANCVFFLKVNHLSVQDKKKIKSHIQENGGIISFVLNKKCSHIIVDNIDSLSSYQ
LKTIQKYQIPILCGDFIRNCVEERRLLQVDDYAVKKSVEIDPETGTESQDQEKIQFFEKP
REWNEKDTESNRFYTKDNLDPNDLQDVKVAKHAVLEKLLPNFKEIAVVELQRLPEHYAFP
FRISANFGLSDGSQKEKQFLQWKTSEEACESYDVYLEDLKKKDFKLKEDVPQEAIHFASE
TLQEQLLEEARNTSILSPEIHNFVELIWVEALGHLDHILGQPVNSISLNDVSKGEGILLQ
VKKALDNGASAEVLKQMMLEFYRIIPHKSGINYNVDKRLLSSKEDLCQLIRDMVNVCEAS
MSCPNPPSLAKYHALRCKIDYVDPDSDEFLQVEHQVLQNSRSYSAAKILQIYRVGRMNET
AAFQSKYSNIQSLLHSSSVCNFVGILSRGLLLPKMVVEDHGLERTDIGNLGSGIYFGDSI
STCIKYSKPSETDGSRFIVVCSVALGKCMELYKRDFSLANAPAGYQSVRGVRKAPGILSD
FEDDEFVVYNTNQIKMRYIIKFLMEEDNMKEFYPDVRITEIAERIPCMSHLQSEEISLDT
NSLHEIKAGLLDTSGNSVPLKDIHITGRIMDIIAQVVVFQTYTNLSSIPIEAKYVFPLDG
TAAVCGFEAFINGKHIIGEVKEKGQAHQEYRQAVSEGHGAYLMDQDAPDVFTVSVGNLPA
EATVLIKITYITELSMQWGSVYFRVPAAVAPWQQDKALKENTQDTVEKVYIKTGDAQKGA
FSLDMSVEMPYKIEYISSLTHKIKIKKTDCKAVISTCEGSSLDSDGFDLQISMCDAHLPR
MWVEKHPEHESEACMLVFQPNFDTANNVEDDSEIVICLDCSNSMESSVFQQAKQIALLTL
RSLSDRHRINLVRFGTNYQELFSYPKCTTNRSLLEDYIKLARPMMGNTDLWKPLRSLSLL
APSRCLRSILLISDGHIQNESLTFQIIKKNVKHTRLFACGVGPTANRHMLRSLVQYGAGA
FEYFEAKSKYNWKDKVRAQISRMESPGCSSISVKWQQFNTNAPEPMQAPVQIQSLFHSER
LLVYGFILHCTQATLNAFINDQELHTMVSTTELQKTSGTLLHKLTARAIIKDFEDGILHE
NEAEHEMKKQELKSLIIELSKEYSIVTQFTSFVAIEERGSKITPQPDILNIKELIAKEDI
DLLPYMDWEMNAAEEMQDLMDLSTDEFLIDEFELLKTDVTECLISRNEDYTELAFCLENE
PAPLILNDMLPSAAFPPFAGYPPPPPPLLPPPPPLLPPPPPLSFDLSKFNVQHHEEKRSS
IGIDIVAENYNLPEFPEVSFPPANKVHVHLPSSLLGSPVLPNSFVQKNMDALKIKHTALQ
MEAPTVDQEESKFCIKSFQEQQDSAESYSFMPESGSAIPNKIILYKKKQKADRTSKIGFE
SELVSDMPFFKTPVAQAFGSLNTLEKSQPSSMVQFPMLGPMKGSSSLKETGLFGATFGAS
KIGFESELVSNKTASQRASSLFDMPCTQAPVAQAFRSLNTLEKSPPSSMECSSLILKCSK
QVQFPVLGPVRRRSSSLKNTGFLGTTFGAKSIGVSQQSQPFSVTDLDWHRAGMKLMDPKP
PIPPKTYKINFEPTGTALLALQTQTGFWHLNPDLGDLLEVDVNYLCNVFLAQKGIHSLGP
RGKEEVLQLIATLLVLQLLRFTQVLQLITFKSLMKLDDLSTKRSDAVHWNLQKAVTWARK
TDRQYPTICSRLELGKDWDSFTRQLLRIDPIEVNSPLLKAIKF
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgggaatctttgcaaactgtgtgttctttctgaaagtgaaccatttatctgtt
caggacaagaaaaagattaaaagtcacatacaagaaaacgggggaatcatttcttttgtg
ctaaacaaaaagtgctctcatatcattgtggataatattgattcattaagttcttatcag
ctgaaaactattcagaagtatcaaatccccattctatgtggcgactttattcgaaattgt
gttgaagaaaggcggcttctacaagttgatgattatgctgttaaaaaatcagttgaaata
gatccagaaacagggacagaaagtcaagaccaagaaaagatccagttttttgagaaaccc
agagagtggaatgaaaaagatactgagagcaacagattttataccaaagataatctggat
cctaatgatcttcaagacgtcaaagttgcaaaacatgctgttcttgaaaaacttctgcct
aatttcaaggaaattgcggttgttgagctgcagcgtctaccggaacattatgcatttcca
tttcgcatttcagcaaactttggtttatcagatggatctcagaaagaaaagcagtttctg
cagtggaaaacttcagaggaagcttgtgaaagttatgacgtctatctcgaagatctcaag
aagaaagatttcaagttaaaagaggatgtcccccaagaagcaattcattttgcttctgag
acactgcaggagcaactccttgaagaagctagaaatacaagcatcttatctccagagata
cataattttgtggagctaatttgggtagaagcacttggccatttggatcatatacttggc
caacctgtaaacagcattagcctcaatgatgtgagcaaaggtgaaggtattttgcttcaa
gtcaaaaaggcgctggataatggagcttcagcagaagttttgaaacagatgatgttggaa
ttctatcgcataatccctcataaaagtggaatcaattataatgttgacaaaagactcttg
tcctccaaagaggacctgtgtcagttaataagagacatggttaatgtctgtgaagcaagc
atgtcatgccctaatccaccctctcttgccaaataccatgctttgagatgcaaaatagac
tatgtggatccagacagtgatgagtttctacaggttgaacaccaggtgctacaaaacagt
cgtagctactctgcagcgaaaatcctgcaaatataccgagttggcagaatgaatgaaaca
gcagcatttcagagcaagtacagtaatattcagtccttactccattcctcttctgtctgc
aactttgttggcattctctctcgtggtttactcttaccaaagatggtggtagaagatcac
ggcttggagaggacagatattgggaaccttggcagtggcatttactttggtgattctatc
agtacatgcatcaaatactcgaagcccagtgaaactgatggttcccggttcatagtggta
tgtagtgtggctcttgggaaatgcatggagctgtacaagagagatttctcattagccaat
gccccagcaggatatcagagtgtacgtggggttcggaaagcaccaggcatcctctcagac
tttgaggatgatgaatttgttgtatataatacaaaccagatcaaaatgagatatattata
aaatttctcatggaggaagacaatatgaaggagttttatcctgatgtacggattaccgag
atagcagaaagaattccatgcatgtcacatttacagtcagaagagatttctttggataca
aactcattgcacgagataaaagctggtcttctggatacttctggtaactctgttcccctc
aaagatattcatattacaggaagaataatggacataattgcacaggtagtggtttttcag
acatacactaatttatccagcattcccattgaggcaaagtatgtctttcctttggatggc
acagcagctgtgtgtgggtttgaagctttcatcaatggaaaacatatcataggagaggtg
aaggaaaaaggccaggctcaccaggagtacagacaagctgtcagtgaaggtcatggggct
tacctgatggatcaggatgcaccggatgtttttactgtaagtgttggaaacttgccagcg
gaagctactgttttgatcaaaataacttatatcactgagctgagtatgcagtggggatct
gtatatttccgtgtgcccgctgctgtggcaccttggcaacaggacaaagcgctcaaagaa
aacacacaggacacagtagagaaggtttatattaaaacaggagatgcacagaaaggggct
ttctctttggatatgtctgttgaaatgccgtacaagattgaatacatttccagcctaaca
cacaaaattaaaataaagaaaactgattgtaaagctgtgattagcacctgcgaaggctct
tcattagacagcgatggctttgatttacaaatatccatgtgcgatgcccacctccccaga
atgtgggtagaaaagcacccagagcatgagagtgaggcatgcatgctggtgtttcaaccc
aattttgatactgcaaataatgtggaggatgacagtgagattgttatttgtttggattgc
tccaattctatggagagctcagtatttcaacaagccaagcagattgctcttcttacactg
aggtctcttagtgaccgtcaccgaataaaccttgtcaggtttggcacaaattatcaagaa
ttattttcctatccaaagtgcacaacaaatagatccttattggaagactatattaaactt
gccagacctatgatgggtaacactgacttgtggaaacctttgcgctctttgagtttgtta
gcaccttcccgttgtctgcgcagtattctactaatatccgatggccacattcagaatgag
agccttacttttcaaattataaagaagaacgtcaagcacacaaggttatttgcctgtggt
gttggtcccacagcaaatcggcatatgctcagatctttggtgcagtatggggctggagca
tttgaatattttgaagcaaaatctaagtataactggaaggataaagtaagagcccagatt
tcacgaatggaatccccaggatgcagttccatttctgtgaagtggcaacagtttaataca
aatgctccggaaccaatgcaggctcctgttcaaatacagtctctgtttcacagtgagagg
cttcttgtgtatggatttattcttcattgtacacaagccactctcaatgcattcattaat
gatcaagaactgcatacaatggtgtcaactactgaattacagaagacctctggaacacta
cttcataagcttacagcacgagcaataattaaagattttgaggatggaattcttcatgag
aatgaggctgaacatgagatgaagaaacaagaattaaagtcacttataattgagcttagc
aaggaatactccattgtgacccagtttacaagttttgtggccattgaggaaaggggttcc
aagataacaccacagcctgacatactgaatattaaagaacttatagccaaagaagatata
gatctccttccttacatggactgggaaatgaatgctgctgaagagatgcaagacttaatg
gatttaagtacagatgagtttcttattgatgaatttgaattactcaagactgatgttaca
gaatgcttaatatcacgaaatgaagattacacggagcttgcattttgcctagaaaacgag
ccagcaccacttattttgaatgatatgttgccatcagcagcttttcctccctttgctggt
tatcctcctcctcctcctcctcttcttcctcctcctcctcctcttcttcctcctcctcct
cctctctcttttgatctttctaaatttaacgtgcagcatcacgaggagaaacgttcttcc
attggaattgatatagtggcagaaaattacaacttgcctgaatttccagaagtgtcattt
ccccccgcaaataaagtacatgttcacttaccatcttctcttctcggaagtcctgttttg
cctaactcatttgtgcagaagaatatggatgctttgaaaatcaaacatactgcgctacaa
atggaagcacctactgttgatcaagaagaatccaaattctgtataaaaagcttccaggaa
cagcaagattcagctgaatcttattctttcatgcctgaatctggatctgccattcctaat
aaaattattctatataaaaagaagcaaaaagctgatagaacaagtaaaattggctttgaa
tctgaattggtctccgacatgccctttttcaagacacctgtggcacaggcatttggaagt
ttaaataccttggaaaaatctcagccgtcttctatggttcaatttccgatgttaggacct
atgaagggatctagttcattgaaggaaactggactttttggagcaacttttggagccagt
aaaattggctttgaatctgaattggtctcaaataaaactgcttctcagagagcttcttct
ctattcgacatgccctgtacacaggcacctgtggcacaggcatttagaagtttaaatacc
ttggaaaaatctccgccttcttctatggaatgcagcagtttaatcctcaagtgcagcaaa
caggttcaatttccggtgttaggacctgttaggaggagatctagttcattgaagaacact
ggatttttgggaacaacttttggagccaaaagtattggtgtcagtcaacagtcacaacca
ttttctgtgaccgatcttgattggcatagagcaggaatgaaattaatggatccaaaacca
ccaattcctccaaagacatacaagataaattttgaaccgactgggacagctttacttgca
ctccaaactcagactggtttttggcatcttaatccagaccttggggatttgttggaggtg
gatgttaattacctatgcaatgtcttccttgctcagaagggcatccattcactaggccct
agaggaaaagaagaggtactgcagttgattgccactcttctagtgctacagcttctaagg
ttcacacaagtgctacaattgataaccttcaagtctctgatgaaactggatgacttatcc
actaagagatccgatgctgttcattggaatttacaaaaagctgtgacatgggcaagaaag
acagatagacaatatccaaccatatgcagtcggcttgaattgggaaaggactgggactca
ttcactcggcagctattacgtattgacccaattgaggtcaactcacctcttctgaaggca
attaagttctga
DBGET
integrated database retrieval system
