Geotrypetes seraphini (Gaboon caecilian): 117367560
Help
Entry
117367560 CDS
T09159
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04020
Calcium signaling pathway
gsh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117367560 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117367560 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117367560 (GRIN1)
Ion channels [BR:
gsh04040
]
Ligand-gated channels
Glutamate (ionotropic)
117367560 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
117367560
NCBI-ProteinID:
XP_033816102
UniProt:
A0A6P8SD18
LinkDB
All DBs
Position
10:109074522..109490086
Genome browser
AA seq
924 aa
AA seq
DB search
MDTMRLFLLAVLFSFSFARAGCDPKIVNIGAVLSHRKFEPIFREAVNQANKRHGTWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHSPASNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFELMRKFKWNHIILIVSEDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKADKVLHFNPGTKNMTSLLLEAKELEARVI
ILSASEDDAASIYKAAAPLNMTGPGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVGVVGQAIHELLEKENITDPPKGCVGNTNIWKTGPLFKRVLMSSKYPDGVTGRVE
FNEDGDRKFANYNIMNLQNRKLVQIGIFNGSQVLLNDRKIIWPGGETESPQGYQMSTRLK
IVTIHQEPFVYVTTIFPDGTCTDDFTVNGYKVTKVLCSGPNETVPGRPHVLHCCYGFCID
LLLKLSREMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAMEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLNILKSHENGSMEELDKKWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKNGRAEPDPKKKASFR
SITSTLASSFKRRRSSKDTPYFRI
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatgcgcctatttctgcttgctgtactgttttcattttcttttgctcgggct
ggatgtgatcctaaaatcgtaaacattggagccgtgctgagccacagaaagtttgaacca
atctttcgagaagccgttaatcaagcaaataaaagacacgggacttggaaaattcaattg
aatgccacttcggttacccacaagcccaatgccatccagatggcactgtctgtgtgtgag
gacctcatctccagccaggtctatgcaatattagttagccattcacctgcgtccaatgac
cacctaacaccaacccccgtctcatacacagccggcttctacaggattcctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccatctatccttcctccgcacc
gttccaccttattcccaccaggccaatgtctggtttgaactgatgcgcaaatttaaatgg
aaccacatcattctcattgtcagtgaagatcatgagggtcgagctgcccagaagaaactg
gagaccctccttgaagaaagggagtcaaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgataaagtcctgcatttcaacccg
gggactaagaacatgacttctctgctgctggaagcaaaggagctggaggctagagtcatc
atcctgtcagccagcgaggatgatgcagcctcaatttacaaagcagcagcacctctaaac
atgacaggaccaggatatgtctggctggtgggagagagagagatctctggaaatgcttta
cgctatgcacctgatggggtcattggattgcaacttatcaatggcaaaaatgaatcagcc
cacatcagtgatgctgtgggtgtggtgggacaggcaatacatgagcttctagaaaaagag
aacatcactgacccacccaaaggctgtgttggaaacaccaacatctggaaaacaggaccc
ctttttaagagggtgctgatgtcttccaagtacccagatggtgtcactgggcgagtggag
tttaatgaagatggggacaggaaatttgcaaattacaacatcatgaacttacagaatcgt
aaacttgtccagattgggatcttcaatggcagtcaagttctactgaatgaccggaagatt
atttggcctggtggagaaactgagagtcctcagggatatcaaatgtcaacaaggctaaag
atagttacaattcatcaggaaccattcgtgtatgtgacaacaatttttccagatgggact
tgtactgatgatttcaccgtcaatgggtataaagtcactaaagtattatgtagtggacca
aatgaaactgtaccaggccgtccccatgttctccactgctgctatggcttctgcatagac
ctacttctcaaactgtcacgggagatgaatttcacttatgaagtgcatttggtggctgat
ggaaaatttggaacccaagagcgggtaaataacagcaataagaaagagtggaatgggatg
atgggagagttactgagtggtcaggcagatatgattgtggctcctctaaccatcaacaat
gaacgagcacagtacattgagttctccaagcccttcaagtaccaaggactcacaatcctg
gttaaaaaggaaataccccgcagcacgctggattcatttatgcaaccctttcagagcaca
ctctggctcctagtgggcctctcagttcatgtggtagcagtgatgctatatctattagat
cgtttcagcccgtttggccggtttaaagtgaacagtgaggaggaagaagaagatgccttg
accctttcttctgccatgtggttctcttggggtgtcttgctgaattctggcataggagaa
ggtgcaccccgcagcttttcagcccggattctgggcatggtatgggctggatttgctatg
attattgtggcttcctacactgccaaccttgctgccttcctggtgctggacaggccagag
gaaaggatcacaggaattaatgaccccaggctacgcaacccttcagataaatttatctat
gccacagtcaagcagagttcagtagatatttatttccgaaggcaagtggaactgagcaca
atgtatcgccacatggagaagcacaactacgagagtgcaatggaggcaatccaggctgtg
cgggacaacaagctacatgcctttatctgggattcagctgtgctagagtttgaagcctca
cagaaatgtgatcttgtgaccactggggagctctttttccgctcaggctttggaattggt
atgcggaaagacagcccttggaagcagaatgtctcactcaatattctcaagtcccatgag
aatggttccatggaagagctggacaaaaagtgggtgagataccaggagtgtgattctcgt
agcaatgcaccagctacactcacgtttgagaatatggcaggtgtatttatgctggtggct
ggaggaattgttgctgggatatttttaatattcatagaaatagcttacaaaaggcacaaa
gatgcaaggagaaagcagatgcaacttgcttttgctgctgttaatgtctggagaaaaaac
cttcaggatagaaaaaatggtagagcagaacctgaccctaaaaagaaagcctcttttagg
tccatcacctccaccctggcctccagcttcaagagacgtaggtcatccaaagacacgcca
tattttcgcatctga
DBGET
integrated database retrieval system
