KEGG T09159: 117368286

Geotrypetes seraphini (Gaboon caecilian): 117368286

Entry

117368286         CDS       T09159

Symbol

POLR2I

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB9

K03017

DNA-directed RNA polymerase II subunit RPB9

Organism

gsh Geotrypetes seraphini (Gaboon caecilian)

Pathway

gsh03020

RNA polymerase

gsh03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:gsh00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117368286 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117368286 (POLR2I)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsh03021]
    117368286 (POLR2I)
   03400 DNA repair and recombination proteins [BR:gsh03400]
    117368286 (POLR2I)
Transcription machinery [BR:gsh03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117368286 (POLR2I)
DNA repair and recombination proteins [BR:gsh03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117368286 (POLR2I)

SSDB

Motif

Pfam:

RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR

Other DBs

NCBI-GeneID:

117368286

NCBI-ProteinID:

XP_033817683

UniProt:

A0A6P8SMY5

LinkDB

Position

10:complement(128985567..129002080)

AA seq 125 aa
MEVDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE

NT seq 378 nt +upstreamnt +downstreamnt
atggaggtggatggcacttatgagcctggctttgtggggatccgtttctgccaggaatgc
aataacatgttgtaccccaaagaagataaagaaaacagaatcctgctgtatgcttgtcgt
aactgtgactatcagcaggaagctgataacagttgtatctacgtcaataagatcacgcat
gaagttgatgagttgacccagatcattgctgatgtctcccaggacccaacgctacctcga
acagaagaccatccctgtcagaagtgcggacacaaagaggccgtcttcttccagtctcac
agtgctagagctgaggatgccatgagactgtattatgtgtgcacagcgcctcactgtgga
catcgatggactgagtga

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