Glycine soja (wild soybean): 114373560
Help
Entry
114373560 CDS
T06057
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114373560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114373560
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114373560
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
114373560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
114373560
NCBI-ProteinID:
XP_028186840
LinkDB
All DBs
Position
11:11230120..11259460
Genome browser
AA seq
1391 aa
AA seq
DB search
MNRARTEGITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIH
GGLLDPRMGPANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGC
ARILLDEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVVNCPRCGYINGSVKKLPA
SLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELL
YVAERPEKLIMTNVVVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQESTF
SSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVE
YTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLR
RDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPW
RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQ
DFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILR
PHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTLGN
GNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETI
SEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSP
LIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANS
FYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSI
VQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSE
FDLSRLAEKGVFEVGFSADFVESLQSFIKDNAKLTEEGFTDEHSQNLKKFGQRISGITRK
QLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR
VKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVV
ITLDMKRIQDAHLNIDANIVKESILRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKIHFQ
LHYLKNLLPTVVVKGIKTVDRVVISKDTKAEKFRLLVEGTGFREVMGVEGIDGRKTVSNH
IHEVRDTLGIEAARESIVKEIKYTMVDTHGMNIDIRHMMLLADMMTATGHILGINRFGIS
KMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPIQIGTGMIKVKQRLDPP
ELPHGTSPILS
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatagggcgagaactgaaggcataactttcacgaaggagccgttcatggaggataca
gggcctcgcaagataaagaacatgaagttctccacgttatcagaatcggaaataagcaaa
atcgctgaagttcaagtgtggaaaggttcctactatgactcctttaagaagcctatccac
ggtggcttgttggatcctcgcatgggccctgctaataagagtcttgtctgtgcaacatgc
gatgggaactttcatgattgtccagggcactatggatacttaaaccttgcccttcctgtt
ttcaatgttggatatttaagtaccattgtggaaatactgaagtgcatttgtaagggctgt
gctcgtattctccttgatgaagatacccgtaaaaaacatctgaagaaaatgagaagttcc
aaaaagagtgagctggataagattgattttgtgaaagttcgtgtaattaaagattgtagc
aaagttgtgaattgcccaagatgcggatatatcaatggttcagtaaagaagcttccggct
tcgctgacaatcatacatgattgctcaaaatgtagaaattatattgttgaagagcttgat
tccgcactttctcgtatgaaagactctagggcgaccaccaatgtgtctaatcgaattctt
aatcctttccaagttctttccctgtttaaaagaatgcttgatgaggactgtgaattactt
tatgttgctgaaagaccagagaaactcataatgacaaacgttgttgtgccacctatagct
attcgaccttcagttgttatggatgaatcactgagcaacgaaaatgacataacagagagg
ctaaagaacataatccaagcaaatgctgttttgcgccaggaattacaagaatcaactttt
tcgtccaaatttctggatggttgggatatccttcaaaatgaagttgctcagtttataaat
agtgatgtccgtggtataccattctatatgcaaccgaccaagcaattggctggttttgtt
cagcgcttgaaagggaagcatggacgtttccgcggcaacttatctggtaaacgtgttgaa
tatactggcaggacagttatttcacccgatcctaatctgaagatttcagaggttgcaata
cccatccatatggctcgtatattgacttatcctgagcgtgttactcaccacaacatagaa
aagttgagacaatgtgtgagaaatggtcccgataagtatcctggtgcgagaatgcttaga
cgtgatggaggtcactcatggtccttaaaagttctttgtaggaagcgtgctgcagatgaa
ttgaggattggtgatattgttgatcgccatttggaagatggagacattgttcttttcaat
agacagccaagcttgcatcggatgtctataatgtgtcacagggcaaggattatgccttgg
agaactttaagattcaatgaatctgtatgtaacccatataatgctgactttgatggtgat
gagatgaacttacatgtcccacagactgaggaggctaggacagaggctattttgttgatg
ggggtggaaaacaatttgtgcactccaaaaaatggcgagattctggttgcttctactcaa
gactttttaacctcttcctttctcataaccaggaaagatactttttacgaccgttctacc
ttttcacttatttgctcgtacataggtgatggcatggatcctattgatctgccaactccc
gcaattgttaagccagttgaactttggagtggtaagcagttatttagcattatactgcgc
ccacatgctaatatgagagtctatgtgaatcttactgttaaggagagaaactacactgaa
gacaagaaaataaaagacaagaaaatagaatggaaaacattgtgcccaaatgatgggttt
gtttattttcgtaatagcgagttgatctctggacaagttggaaaggttactttaggaaat
ggcaacaaagatggactgttctctgtgctactgagagactatagagcacatgctgctgca
tcttgcatgaatcgtttagctaaattgagtgcacgatggattggcaatcatgggttctca
ataggcattgatgatgtccaaccaaaagagattctgattaacaagaaagatgaaacaatt
tcagaaggttatagggaatgtgataaacacatagaagctttcaataagggaaaactagaa
ctcttagctggttgtgatgctgcgcagacattagagactcggattactggggtattaaat
ggacttcgtgatacggcagggaaggtctgcatgcaaaccctacactggagaaatagtcca
ttgatcatgtcacaatgtggctccaaaggatcttctattaatatcagtcaaatggttgcc
tgtgttggtcaacaatcagtcggtggtcgtcgtactcctaatgggttcatagatcggagc
cttcctcatttccccagaaaatcaaaaacccctgctgcaaaaggttttgttgctaattcc
ttttacagtggattgtcagctactgagtttttcttccatacaatgggagggcgagaaggg
cttgttgatacagcggttaaaactgcagacacgggatatatgtctcgtcaattaatgaaa
tccctagaggatttgtttttacattatgattatactgtaagaaatgctggtggctctatt
gttcaattttgctatggagatgatggtatggatccagcaggcatggaaggaaaaaatgga
aaaccattgaattttgagcggttgtttcttaaaagcaaggccatatgtcccaatgatgaa
gatgatgaaattttatcttcctcagatgtgagtaaagtagttcatgagaagctctcagaa
tttgatttgtctaggttagcagagaaaggggtttttgaggtgggcttctctgctgacttc
gttgaatctctacaatcctttatcaaagataatgcaaaattaacggaagaaggtttcact
gatgagcattctcaaaacctgaaaaaatttgggcagaggatatctgggatcactcgtaaa
cagctagatgtttttttgaatatttgtctatctcgttatcattccaaaaaaatggaggct
ggagctcctgttggtgcaactggagctcatagtattggagagcctgggacccagatgact
ttgaaaactttccactttgctggagttgcaagcatgaatgttactcttggagttcctcgt
gtcaaagaaataatgaatggaaacaaaaaaatcagtacaccaattatcactgctatactt
gagagggatgacaatgcaaatactgcaagaattgtaaaaggtcgaatagaaaaaacaaat
ttaggccaggttgcaaagagtataaaagttgttatgacttcaagatcagcatcagttgtt
atcacccttgacatgaaaagaatccaggatgcacatctaaatatagatgctaatattgta
aaagaatcaattttacgaactaaaaagacaaaactgaaaccagagcatatcaagatttta
gatattaaaaagcttgaagtggttccccaagatgtggatagaagtaaaatccattttcag
cttcactatctgaaaaatttgcttccgacagttgtagtgaagggcattaaaactgtggat
cgagttgttatcagtaaagacaccaaggctgaaaagttcagattactggtggaaggcacg
ggttttcgagaggttatgggagttgaagggattgatggacgtaaaactgttagtaatcat
atccacgaagtgagggacacactgggaattgaagctgctagagagagtattgttaaggag
ataaagtatacaatggtggatacacatggaatgaatatagacatacgccatatgatgctt
ctagcagatatgatgactgccacgggtcatatccttggaataaatagatttggaatttca
aagatgggcaaaagtgtattaatgcttgcatcattcgagaggacagcagatattcttttc
caggcatctgtacgtgggagggatgactcgattggtggagtaagtgaatccataatcatg
ggtataccaattcaaataggtactggaatgatcaaggtcaaacaaaggttggatcctccg
gagttgcctcatggtaccagtcctattctatcttga
DBGET
integrated database retrieval system
